Nonlocal Models in Biology and Life Sciences:
Sources, Developments, and Applications
Abstract
Mathematical modelling is one of the fundamental techniques for understanding biophysical mechanisms in developmental biology. It helps researchers to analyze complex physiological processes and connects like a bridge between theoretical and experimental observations. Various groups of mathematical models have been studied to analyze these processes, and the nonlocal models are one of them. Nonlocality is important in realistic mathematical models of physical and biological systems at small-length scales. It characterizes the properties of two individuals located in different locations. This review illustrates different nonlocal mathematical models applied to biology and life sciences. The major focus has been given to sources, developments, and applications of such models. Among other things, a systematic discussion has been provided for the conditions of pattern formations in biological systems of population dynamics. Special attention has also been given to nonlocal interactions on networks, network coupling and integration, including models for brain dynamics that provide us with an important tool to better understand neurodegenerative diseases. In addition, we have discussed nonlocal modelling approaches for cancer stem cells and tumor cells that are widely applied in the cell migration processes, growth, and avascular tumors in any organ. Furthermore, the discussed nonlocal continuum models can go sufficiently smaller scales applied to nanotechnology to build biosensors to sense biomaterial and its concentration. Piezoelectric and other smart materials are among them, and these devices are becoming increasingly important in the digital and physical world that is intrinsically interconnected with biological systems. Additionally, we have reviewed a nonlocal theory of peridynamics, which deals with continuous and discrete media and applies to model the relationship between fracture and healing in cortical bone, tissue growth and shrinkage, and other areas increasingly important in biomedical and bioengineering applications. Finally, we provided a comprehensive summary of emerging trends and highlighted future directions in this rapidly expanding field.
keywords:
Nonlocal models; nonlocal interactions in time and space; cell biology, genomics, and populations dynamics; network coupling and integration; epidemiology and immunology; pattern formations; nonequilibrium phenomena and processes; health sciences and innovative technologies; smart and intelligent systems; active matter and AI.1 Introduction
Nonlocal interactions are an intrinsic feature of many natural processes and phenomena studied in life sciences. Mathematical models assist such studies with a rigorous foundation and, together with computational models and techniques, provide additional vital insights, complementing experimental investigations. In 1923, Dr. W. M. Feldman introduced the term “biomathematics” in the book title, a highly relevant discipline nowadays [1]. He was a physician and was more interested in the numerical data of some of his patients’ more common dynamics. In 1938, a theoretical physicist Dr. N. Rashevsky, published the first book on mathematical biology and mathematical biophysics entitled “Mathematical Biophysics: Physico-Mathematical Foundations of Biology” [2]. Due to many technological advances since then, biomathematics has evolved from Feldman’s simple “mathematical principles for biology students” to one of the most promising tools for biology and medicine. Mathematical models help break down their dynamic processes into individual elements to study a natural biological process. Moreover, these models can bridge the gap between proposed molecular interactions inside and between cells and their tissue-level effects. As they developed, the hybrid field of “biostatistics” emerged and helped to analyze different scientific issues mathematically, e.g., biodiversity, agriculture, medicine, etc. Alan Turing also contributed to biomathematics by discovering the condition for particular shapes of each organism, and he is known as “the founder of contemporary Mathematical Biology”. In addition, his works included three main ingredients: modelling, differential equations, and numerical solutions [3].
Mathematical models deal with one or more equations (discrete-time, continuous- and fractional-time ordinary and partial differential equations) depending on the component(s) of the system [4, 5, 6]. In addition, one or more parameters may be involved in the model to capture its different characteristics [7, 8]. Discrete-time models governed by difference equations are more appropriate for organisms with non-overlapping generations, e.g., an insect population with one generation per year [9, 10]. On the other hand, ordinary and/or partial differential equations are used for continuous-time models and are appropriate for organisms with overlapping generations [11]. In addition, fractional-time models are mainly used to incorporate the memory effect of the organisms in time. In this article, we cover both continuous- and fractional-time models.
The model described by an ordinary differential equation (ODE) queries the state of an entity at a given time; hence, only the time derivatives are present in such systems. For instance, the simplest SIR model in epidemiology helps to predict different things, such as how a disease spreads, the total number infected, and the duration of an epidemic [12, 13, 14]. These models also deal with cell signalling pathways, population growth, enzymatic inhibitor reactions, and ecological models. In studying the temporal dynamics of a system, the major concern is shifting one equilibrium to another equilibrium or non-equilibrium (e.g., limit cycle) by a small perturbation around it [4, 15, 16]. The temporal dynamics of a model are described by its reaction terms, which mainly include birth, death, and interactions between individuals. Sometimes, a small perturbation may completely change the dynamics of a system, known as butterfly effects in chaos theory [17]. Along with the ODE models, fractional-order differential equation (FODE) models also play a crucial role in biological systems. The fractional differentials are interpreted in terms of Riemann-Liouville [18], Caputo [18], Caputo-Fabrizio [19], and Riesz [20] fractional derivatives. FODE provides a powerful tool for describing the memory of different substances and the nature of the inheritance, and memory and genetic properties are the two key factors in biological modelling, e.g., membranes of cells have fractional order electrical conductance [21], cell rheological behaviour [22]. FODE is also studied in the epidemic model of SIR type to understand the memory effect on disease propagation [23].
The use of spatio-temporal models has increased in the scientific literature, and it has additional benefits over temporal studies [24, 25, 26]. It can capture localized clusters or heterogeneity of the space-time interactions between the components of a system. The word heterogeneity describes the difference or diversity in a system, which means “lots of different things”. Such differences can occur in space and time, and in ecology, this term is mainly used to describe the land cover or habitat [27]. On the other hand, a homogeneous system is a single-phase system of continuous variables, and each of these variables is distributed uniformly throughout the domain of definition. This homogeneity or heterogeneity depends on the scale considered [28]. For example, one heterogeneous habitat can be seen fifty meters from its top, but it can look like a homogeneous habitat from five hundred meters or above. Looking at the blood with a bare eye seems homogeneous, but it has different components like red blood cells, plasma, and platelets under the microscope. In reality, heterogeneity comes when every member has different values for the characteristics of our interests. Well-known reaction-diffusion (RD) equations can capture this type of heterogeneous phenomenon. These equations are conventionally used in chemical interactions to describe the concentrations of the chemicals at different times in a system but are later applied to different fields [29, 30, 31, 32, 33]. The Gierer-Meinhardt model and its relevant modifications capture different biological processes such as animal skin patterns, nerve cells and their activities, organ formation, etc. [34, 35]. In chemistry, the well-known CIMA reaction can generate different types of spatial patterns, explained by RD modelling [36, 37, 38]. These spatio-temporal models also describe health outcomes, such as contracting a disease, in different locations and spatial points in time [39].
Starting with Fisher’s (1937) seminal work on gene spread, researchers have developed various ways of modelling spatial interactions in biology. Nowadays, nonlocality is emphasised in mathematical biology. This manuscript focuses on different nonlocal models based on individual interactions, which may help biologists capture essential features of spatial phenomena. The concept of nonlocality exists everywhere, and it is essential in realistic mathematical models of many aspects of the physical world [40]. In an ecosystem, organisms compete for resources to survive, grow, and reproduce. Animals compete for air, food, shelter, water, and space. Plants compete for needed resources, including air, water, sunlight, and space. Therefore, in ecology, there is no real justification for assuming the interactions as local since (i) the population always competes for shared resources, (ii) the individuals in a population communicate either visually or through chemical means [41]. In addition, the species sense their surroundings for making different decisions, e.g., the predator finds the prey or the prey avoids the predator [42, 43]. High population density at a spatial location impacts the same spatial point and neighbouring locations, so considering the impact of long-range effects is important. Many particles sense signals over extended regions, e.g., filopodia in cells detect signals at multiple cell diameters away [44, 45]. Along with these factors, dispersal distances may also be nonlocal, e.g., seeds can be transported significantly from the source. The spatial convolution is more realistic than the usual diffusion for many ecological populations [46]. Different methods have been used for kernel estimation, including dispersive individuals [47].
The usual RD model in interacting species can capture only the spatial interactions of neighbourhood locations, generally called short-range interactions. On the other hand, the nonlocal term incorporates the behaviour of a distribution function at several points, and a system of integro-differential equations describes it. Generally, these nonlocal models deal with long-range interactions in the interacting populations. Along with these nonlocal RD models, nonlocal advection-RD models have also gained more attention in recent years. These models have the capacity to include cell-cell adhesion interactions for tissue dynamics [44]. Nonlocal mathematical models are also used to investigate the progress of an epidemic, including age-structured modelling [48, 49]. Furthermore, a system of integro-differential equations is used to describe the general nonlocal continuum theory, which helps to make bridge-base sensors and is applied to biological sciences [50, 51, 52, 53]. In addition, the spatial dispersal mechanism of cells or organisms is one of the central topics in biology and ecology. Random dispersal has been used to describe the movement of organisms between adjacent spatial locations. However, for some organisms, the movements can occur between non-adjacent spatial locations, and the nonlocal dispersal captures such behaviours [54].
Multiscale modelling approaches of materials can capture one or more physical phenomena at different lengths and/or time scales [55, 56]. Materials generally exhibit and secrete different phenomena at different lengths and time scales [56]. Due to the lack of measures and length scales in classical mechanics, the material’s microstructural features (e.g., micro-slipping and twinning), geometries, and/or topologies (e.g., band-gap) are unpredictable. Hierarchical and hybrid are the two types of multiscale modelling approaches studied in the literature. In the case of the hierarchical multiscale model, the material is broken down into multiple scales, and models at the different scales are run independently. In the end, coupling parameters are introduced to couple those scales. On the other hand, all different scales work together as a single package for hybrid multiscale models. The material consists of interconnected multiple subdomains over short and long ranges, and the nonlocal continuum mechanics model can capture their mechanics.
Nonlocal models are capable of capturing some behaviour of biological materials such as cortical bone fracture [57], the rupture in lipid membranes [58], tumor shrinkage [59], etc. Peridynamics is one of the main theoretical and computational frameworks that unify the mechanics of discrete and continuous media [59]. Since the first papers were published, peridynamics methodology has been used to model discontinuous and long-range forces using pair-wise interactions between particles [60]. This methodology is nonlocal due to considering the long-range interaction between particles. As it deals with continuous and discrete media, it is a compelling model of biological tissue on the cell population scale. In addition, piezoelectric and other smart materials are the most commonly used medical materials. For instance, ultrasound scanners use a piezoelectric transducer; they use the converse piezoelectric effect to send out sound vibrations reflected by muscles, organs, etc. [61].
The rest of the paper is organized as follows. Different types of local and nonlocal models are described in Sect 2. We start with local RD systems applied to ecological and chemical interactions. In particular, how the nonlocal Fisher-KPP equation comes in a single species population is discussed. Then, the nonlocal models capture different kinds of nonlocal phenomena. For instance, nonlocal interactions in space-time, multi-body systems, cell biology, multi-stability, ecology, peridynamics, etc. The applications of these nonlocal models are discussed in Sect 3. Different emerging fields and some possible extensions of the nonlocal models are discussed in Sect 4, followed by the conclusions in Sect 5.
2 Life Sciences as a Rich Source of Nonlocal Phenomena and Processes: Mathematical and Computational Models
Mathematical and computational models play a pivotal role in unravelling the intricate and dynamic processes within the realm of life sciences. These models provide a systematic framework to analyze, simulate, and predict biological phenomena, aiding researchers and practitioners in understanding the underlying principles governing life at various levels of complexity. Life sciences encompass a vast array of disciplines, from molecular biology and genetics to ecology and neuroscience. Understanding the behaviour and interactions of biological systems requires the integration of data and theories into mathematical and computational frameworks. These models enable the abstraction of biological processes into mathematical equations, algorithms, or simulations, allowing for a quantitative and often more precise representation of biological phenomena.
2.1 Homogeneous and heterogeneous systems
Homogeneous and heterogeneous systems are fundamental concepts in mathematical biology that play crucial roles in understanding various biological phenomena. Homogeneous systems are the baseline for understanding the fundamental dynamics of biological systems before incorporating more complex factors. For instance, patterns are observed in nature and have visible regularities. These patterns recur in different contexts and can sometimes be modelled mathematically. According to Turing [3], “when two chemical species with different diffusion rates react with each other, the spatially homogeneous state may become unstable, thereby leading to a nontrivial spatial structure”. This looks counter-intuitive as it is expected to be a uniform distribution of the chemical substances through the diffusion term. In general, the diffusion term in RD equations contributes to transferring the concentrations throughout the spatial domain, and the linear or nonlinear reaction terms come from the mass action laws [4, 62]. Without loss of generality, we can consider a general form of RD equations with -substances at time , and at in a spatial domain as [4]:
(1) |
with non-negative initial conditions and appropriate boundary conditions, e.g., Dirichlet, no-flux, periodic, etc. Different types of boundary conditions have been used in RD equations, depending on the nature of the problems; no-flux and periodic boundary conditions are among the most familiar. Here, is a diagonal matrix called the matrix of diffusivity. The term is the self-diffusion of the substances, taking care of the rate of change of the concentrations at a particular point in the spatial domain. The matrix is not a diagonal for the case of cross-diffusion. The initial conditions for all the species are assumed to be non-negative since the concentration is always non-negative. The vector-valued function represents the reactions between the species in the spatial domain . These reactions could be the variables’ source, sinks, and interactions. Therefore, modelling heterogeneous systems is essential for understanding the impact of individual variability on population dynamics, disease spread, and other biological processes.
Depending on the parameters and interactions between organisms, the RD equation (1) exhibits different types of dynamic non-homogeneous solutions, such as travelling waves, wave-trains, spatio-temporal chaos, etc. In addition, reaction-diffusion systems can produce non-homogeneous stationary patterns such as spots, stripes, and target patterns [4]. In 1937, Fisher and Kolmogorov, Petrovskii, and Piskunov introduced the scalar RD equation [63]:
(2) |
and studied the existence of the travelling wave solutions along with the propagation of the wave speed. The equation (2) is known as the Fisher-KPP equation. Researchers have been studying and applying this Fisher-KPP model in various fields, e.g., physics, chemistry, biology, and medicine. A particular nonlinear form of the RD equation (2) has been taken a lot of attention in capturing different phenomena through mathematical modelling, e.g., spatial spreading of cell populations [64], wound-healing cell migration [65, 66], protein misfolding [67, 68], biological invasion [69, 70, 71], etc.
As discussed earlier, the RD equations (1) are capable of producing different types of stationary and non-stationary non-homogeneous patterns. Several mechanisms are available for getting non-stationary patterns [4]. Turing suggested a mechanism to obtain some of the non-homogeneous stationary patterns mathematically, called the Turing pattern [3]. One of the main conditions for existing Turing patterns requires at least two interacting populations for the RD equations. Therefore, the usual Turing mechanism can not be applied to the single-species local RD model (2). However, it can be applied to a single species RD model with nonlocal interactions. We first describe a nonlocal version of the Fisher-KPP RD model for a single species population (2), then move to the multi-species populations and other nonlocal interactions.
2.2 Nonlocal interactions in a single species population
Without loss of our generality, we assume that is a dimensionless population density, and it is defined in the one-dimensional spatial domain , . In the considered case , the population has the reproduction term, which is proportional to its density and available resources [62, 72]. For the local interaction, the population’s consumption rate at any given spatial point is proportional to its population’s density at the same spatial point with the total amount of available resources unity. In general, the individual located at a spatial point accesses the resources at its location and some in its neighbourhood locations [41, 72, 73, 74, 75, 76]. We assume that the individuals located at the spatial point access the resources of the point with the probability density function . In this case, the RD equation (2) modified into an integro-differential equation
(3) |
with non-negative initial conditions and periodic boundary conditions over the domain . Here is the convolution of , and we use ’ as the convolution operator for the rest of this manuscript. The convolution in one spatial dimension is defined by
In the RD equation (2), the diffusion term contributes to the net density change in the spatial locations and is much slower than the involvement of the consumption resources. But in the nonlocal model (3), the convolution term captures the long-range interaction in the spatial domain, one of the key factors missing in the local model. The kernel function satisfies the normality condition to share the same homogeneous steady-state solution corresponding to the local model, and the condition is
The nonlocal model (3) has two homogeneous stationary solutions and . In the case of the local model, the solution is stable under heterogeneous perturbations, but it may not be stable for the nonlocal model [62]. A brief analysis of this single species nonlocal model is given in the next section.
2.3 Nonlocal interactions in time and space
Researchers have studied nonlocal RD models for the triangular, parabolic kernel functions to account for different biological phenomena [77, 78, 79, 80, 46, 81, 82]. These kernel functions are known as the truncated kernel. Such non-truncated kernel functions have been the subject of intensive studies. For instance, Britton introduced an advanced version of the single species model (3) as:
(4) |
where () represents the local aggregation and is the disadvantage in the global population as the resources may go into depletion of being high population density [83]. The author studied the nonlocal model with the Laplacian kernel function [46]. Sometimes, species take time to move; in this case, the correct average population density is a spatio-temporal weighted average toward the current time and position. Taking this spatio-temporal factor into account, Britton introduced a space-time nonlocality in the single species model (4) as [84]:
(5) |
where the double asterisk represents the convolution in space and time and is given by
Likewise, the spatial kernel function in (3), the spatio-temporal kernel function satisfies some conditions mentioned in [84, 85]. In addition, these types of nonlocal models with non-truncated kernels can be converted into coupled RD equations [83, 84]. A brief formulation of this conversion and its applications are given in the upcoming section.
2.4 Nonlocal interactions in cell biology and genomics
In cell biology, nonlocal interactions are interactions between cellular components that extend beyond immediate neighbours and may involve long-distance signalling or communication. These interactions are critical in cellular processes and behaviours such as cell migration, pattern formation, and collective cell responses. For example, tumors are abnormal masses of tissue consisting of cells with different phenotypes (e.g., cancer stem cells) [86, 87, 88], and they are heterogeneously distributed in the body. Motivated by the paradoxical findings of an agent-based model [89], Hillen et al. have proposed a mathematical model [90]:
(6) | ||||
where and are the densities of cancer stem cells and non-stem cancer cells at the location and time . Here, is the total tumour density, and and are the number of cell cycles times per unit time of cancer stem cells and non-stem cancer cells, respectively. The parameter describes the fraction of cancer stem cell divisions, and is the tumour cell death rate. and are the usual diffusion coefficients of cancer stem cells and non-stem cancer cells, respectively. The kernel function describes the rate of progeny contribution to the location from a cell at location , per “cell cycle time” and satisfies the normality condition
Gene silencing and RNA interference are exciting fields of study that have promising implications in health and industry [91]. For instance, a synthetic RNA molecule is designed to selectively target and mute the production of one particular gene in small interfering RNA technology. When it enters cells, it attaches itself to the target mRNA, causing it to be degraded and stopping the creation of new proteins. There are some more key technologies and models associated with gene silencing and RNA interference: short hairpin RNA [92], micro RNA [93], CRISPR/Cas9 technology [94], Antisense Oligonucleotides [95], Dicer Knockout models [96], etc. It is essential to model genetic switches and genetic networks in order to comprehend the complex regulatory processes that exist within cells. The dynamics of genetic switches and networks have been simulated and examined using a variety of computational and mathematical models. Some common approaches are Boolean networks, ordinary differential equations, stochastic models, agent-based models, and machine learning approaches. Furthermore, nonlocal models are important in various areas beyond DNA, RNA, and protein modelling. The use of microarray technology for placing the full human genome on chips is one such application.
A multi-scale modelling technique is required to represent a cell as a composite structure incorporating microtubules and organelles. Several models have been created to simulate these components’ interactions and dynamics, such as continuum mechanics models [97, 98, 99]. Understanding the methods by which a cell develops, duplicates its components, and divides into two daughter cells is fundamental to the study of cell cycles. Modelling cell cycles with fractional derivatives presents a mathematical technique that reflects the nonlocal and memory-dependent character of cellular dynamics. In addition, rheology and hysteresis are more frequently linked with materials and physical systems, and they may also be used to describe some aspects of cellular activity, including cell mechanics and cycles [100]. Understanding the interaction of grain shape, material characteristics, and nonlocal rheology is critical for forecasting and regulating the behaviour of dense granular flows [101].
Different types of biological rhythms occur in various physiological and behavioural processes in living organisms, and they are essential for maintaining homeostasis and optimizing physiological functions in organisms. In addition, angiogenesis is the physiological process that results in the formation of new blood vessels from pre-existing vessels [102]. This complex mechanism is required for a variety of physiological activities, including embryonic development and wound healing. However, angiogenesis has been linked to a number of pathological disorders, including cancer and inflammatory illnesses. Furthermore, biological cells are complex structures with distinct rheological properties, and understanding their mechanical responses is critical for a variety of applications, including disease diagnostics, medication delivery, and tissue creation. The study of these rhythms provides insights into how living organisms adapt to their environments and regulate various processes over time.
2.5 Nonlocal interactions on networks, network coupling and integration
Nonlocal interactions on networks in biology refer to interactions between nodes in a network (such as genes, proteins, or cells) that extend beyond their direct neighbours or immediate connections. These interactions serve as essential for understanding the processes and characteristics of complex biological systems in a network. Furthermore, these interactions on networks are relevant in various biological systems, including signalling networks, ecological food webs, and neuronal networks.
Neurons in the brain communicate and interact through synapses, which can involve long-range connections. Nonlocal models have been employed to describe neurons’ collective activity and synchronization in neural networks. In addition, Alzheimer’s disease (AD) is also growing fast in the current days, and researchers have been trying to understand the mechanisms behind its propagation. Many factors are involved in AD progression, but two protein families, amyloid-beta and tau proteins, are known to be the main contributors [103, 104]. In [105], authors have considered the heterodimer model to incorporate the interaction between these two proteins, each consisting of healthy and toxic densities. Also, they derived the network model corresponding to the PDE model for applying it to AD progression in the brain connectome. Authors in [106] modified the heterodimer model by introducing nonlocal interactions into the model. They studied the following nonlocal network model
(7a) | ||||
(7b) | ||||
(7c) | ||||
(7d) |
where and are the densities of healthy and toxic amyloid beta, and and are the densities of healthy and toxic tau proteins at the node in a given graph. Here, is the total number of nodes and are the entries of the Laplacian matrix for the given network. The convolution and the Laplacian of a graph are defined in [105, 106].
There are nonlocal mathematical models on neural networks, especially convolutional neural networks. The traditional neural network blocks feature representations in a local sense; however, long-range dependencies have significant practical learning problems. Here, we describe a nonlocal network in the context of traditional image classification tasks and make a comparison among different neural networks. Suppose is an input sample with as the feature at position . A nonlocal output signal at position can be defined as [107]:
where is the weight matrix, is the normalization factor, is a pairwise function which computes a scalar between the positions and , and is a given function, e.g., . Incorporating these nonlocal blocks into a residual network, the network model can be written as:
where is a parameter set with number of network blocks with the initial input sample .
Genetic regulatory networks (GRNs) serve an important role in coordinating gene expression and orchestrating complex developmental processes in cells. These networks involve transcription factors binding to particular DNA sequences, cis-regulatory elements, and other substances, resulting in a dynamic and linked web of regulatory interactions. Understanding the abnormal alterations in GRNs gives insight into several disease pathways, such as cancer and developmental disorders [108]. Stochastic transcriptional regulation adds a layer of complexity to GRNs, altering cellular heterogeneity, phenotypic variability, and the general adaptability of biological systems [109, 110, 111]. Furthermore, pattern memory in GRNs is important in cellular decision-making processes, allowing cells to respond to the same stimuli differently based on their past experience.
The spatio-temporal dynamics of biomolecular networks and biochemical systems relate to the complex, dynamic patterns of molecular interactions that occur both in space (inside cellular compartments) and over time [112]. The spatial organization impacts many biomolecular interactions that occur in various cellular compartments, such as the nucleus, cytoplasm, and organelles. Furthermore, spatiotemporal dynamics in metabolic networks are critical for coordinating energy generation, nutrient use, and maintaining cellular homeostasis [113]. Nonetheless, spatial gradients of signalling molecules contribute to the generation of concentration gradients, impacting cell fate and pattern formation throughout development. The dynamics of transcriptional regulation involve both local and nonlocal components, reflecting the complex interplay of molecular processes within a cell as well as interactions that extend beyond immediate neighbours. Local dynamics often relate to nearby activities, such as interactions between genes and transcription factors. In contrast, nonlocal dynamics involve events that affect distant genomic areas or operate across distant locations and temporal dimensions.
2.6 Nonlocal dispersal
Nonlocal dispersal in biology refers to the movement or migration of individuals, cells, or organisms over extended distances, often beyond their immediate vicinity. This phenomenon plays a crucial role in shaping populations’ distribution, dynamics, and persistence in various ecological and biological systems. Species expand their range of interactions through dispersal, which has many forms. Till now, we have considered the simplest type of dispersal as random diffusion, which captures the movement of organisms between adjacent spatial locations. A different type of dispersal that gives rise to nonlocality is studied in the literature, where organisms can travel some distance [114]. Periodic travelling wave solutions have been studied in prey-predator models with nonlocal dispersal to capture cyclic population dynamics. In [46], the author considered the Rosenzweig-MacArthur model with nonlocal dispersal as:
(8) | ||||
where
denotes the nonlocal dispersal corresponding to at a spatial point with as the spatial scale representing the dispersal distance [114]; and are the population densities of the prey and predator, respectively, at the spatial point and at time . This type of nonlocal model is the derivative-free integral equation for diffusion [115]. To study the oscillatory dynamics of the model, the author converted this model into normal form near the Hopf bifurcation using the complex Ginzburg-Landau equation [116]. He estimated the wavelength and amplitude of the periodic travelling wave generated by the invasion of the coexisting steady-state for the parameter values close to the Hopf bifurcation threshold. Assuming specific properties for kernel function (non-negativity, being even, and normality), the nonlocal dispersal operator can be approximated for small as [114]:
On the other hand, for and for a periodic with periodicity , the operator can be expressed as [114]:
2.7 Fractional calculus and nonlocal models
Fractional nonlocal models have gained significant attention in biology due to their ability to capture the memory effect, anomalous transport, and long-range interactions, which are common in biological systems. Fractional calculus has been employed to study drug release from polymeric matrices used in drug delivery systems. These models account for drug diffusion’s nonlocal and memory effects within the polymer, providing a more accurate representation of drug release kinetics. Different nonlocal RD models have been used in biology and other fields. Researchers have used fractional nonlocal models to understand cancer cell populations’ dynamics in cancer diseases. Before going to the fractional model, we first consider a modified nonlocal RD model (3) for nonlocal consumption of resources as [117]:
(9) |
The parameters and are positive integers, and correspond to the asexual and sexual reproductions, respectively. This model is an advanced version of the nonlocal model kinds of (3). Here, , and are the parameters, and is the convolution. The last term in (9) represents the mortality with a rate constant . In cancer disease, abnormal changes in cell density cause significant morbidity and mortality. Numerous mathematical models in the literature account for this disease propagation [118]. The fractional RD model is one of them, and many researchers have been focused on it. The time-fractional RD equation is used in the mathematical model to incorporate such an evolution process, and it is given by [117]:
(10) |
where is the Caputo fractional derivative, and it is defined by
Here, is the first-order partial derivative of with respect to and evaluated at . These models have many applications, and some of them are mentioned in the next section.
2.8 Nonlocal epidemiological models and nonlocality in immunology
Nonlocal epidemiological models have been used to study the spread of infectious diseases in biological systems, considering interactions beyond immediate neighbours and capturing the effects of long-range dispersal and spatial dependencies. In 1927, based on certain assumptions, Kermack and McKendrick proposed a deterministic SIR model to capture a transmitted viral or bacterial agent in a closed population [14, 119]. Here, we first describe the SIR model and its generalization, incorporating the space into the model. Let be the density of a population susceptible to a disease but not yet infected at the time . Suppose is the expected infectivity of an individual who has been infected time ago. Then, the Kermack-McKendrick model follows the integral differential equation [14]:
(11) |
Based on the linearization of the integral differential equation (11), Kermack and McKendrick derived invasion criteria for which the disease invades individuals. To derive those criteria, we suppose that the whole population is susceptible at the epidemic’s beginning and . Also, we assume that the linearized solution at is of the form , and in this case, the characteristic equation is given by
and the number
describes the epidemic’s growth in the initial phase of the disease propagation. The invasion criteria of the epidemic is , which is greater than one. For the special choice , where , the quantity
represents the number of infected individuals at the time . If is the number of individuals who recovered from the infection and may be infected again, then we can simplify all these equations in the following ODE system
(12) | ||||
In 1965, Kendall extended this SIR model (12) into a nonlocal epidemic model [48]. Let , , and be the densities of the susceptible, infected and removed individuals at the spatial location and time such that their sum remains time-independent. We assume that the infected individuals are infectious and that the rate of infection is
where is a positive constant and is the normalized kernel function in . Taking these into the SIR model, the modified model becomes
(13) | ||||
Nonlocal epidemiological models have been applied in biology to study the spread of infectious diseases in spatially extended and heterogeneous environments, such as urban areas with varying population densities or regions with different levels of healthcare access [120]. These models incorporate long-range interactions and spatial dependencies, allowing for a more realistic representation of disease transmission dynamics.
The COVID-19 pandemic was a global health crisis caused by the SARS-CoV-2 virus in a heterogeneous environment [121]. This disease spreads rapidly through respiratory droplets when an infected person talks, coughs, or sneezes, and new variants of the virus continuously emerge, which causes concern among health experts around the world. Different types of measurements have been implemented to control the transmission of the virus, including targeted lockdowns, ramped-up testing, and widespread vaccination efforts. In terms of mathematical modelling, numerous mathematical frameworks have been proposed to investigate the transmission dynamics of the COVID-19 pandemic [122, 123, 124], and we highlight one of them where the spatial domain is considered. The novel coronavirus infects contacts during cold-chain transmission, so the study of the characteristics of COVID-19 dynamics can be more accurate in consideration of long-range population diffusion. Suppose , , , , and are respectively for the populations of susceptible, fully vaccinated, latent infection, asymptomatic infected, and symptomatic infected at a point and time , with as the SARS-CoV-2 virus in the environment. Following [123], we consider the spatio-temporal nonlocal mathematical model for COVID-19 as:
(14) | ||||
with non-negative initial conditions and Neumann boundary conditions. Here, is the dispersal convolution operator defined by
where is the probability that an individual at position moves to position in the space . The functions and are defined as
where are the rate of infection of infected people to susceptible people and are the rate of infection of infected people to those vaccinated, and and are the rate of infection of the virus in the population. The other parameters used in the model (14) are given in [123]. The authors have shown that the effective rate of vaccination is one of the best measures to prevent and control the transmission of COVID-19 under current medical conditions.
Nonlocality in immunology refers to the phenomena in which immune system interactions and signalling processes extend beyond the immediate area of the immune cells involved. T-cell receptor (TCR) activation, for example, refers to the assumption that T-cell responses are not limited to the local contact between the TCR and its antigen. T-cell activation, on the other hand, is a networked and dynamic process that includes interactions at remote places [125]. It can lead to systemic effects, influencing immune responses and inflammation throughout the body, which has implications for autoimmune diseases and chronic inflammatory conditions [126]. Furthermore, nonlocal TCR activation is important in cancer immunotherapy because activated T cells may target cancer cells in distant metastatic locations. [127]. In T memory cell homeostasis, for example, the bone marrow serves as a niche and interacts with stromal cells, and cytokines contribute to their survival and nonlocal homeostasis [128]. These T cells grow and contract in distinct stages, including interactions and signals that reach beyond the T cells’ local surroundings. During T cell activation and proliferation, cytokines such as interleukins are generated not just locally at the site of activation but also systemically. These cytokines assist in the nonlocal regulation of T-cell proliferation [129].
2.9 Relaxation-time models in life sciences
Relaxation-time models are pretty interesting, especially in the context of life sciences. These models help us understand the dynamics of biological systems and provide insights into the time-dependent behaviour of various processes. For instance, the nonlocal model (5) in space and time can be considered as the relaxation-time nonlocal model. A similar type of extension can be applied to the model (13). We first include the spatial variable into the model (13) to account for the random movement of individuals as [130]:
(15) | ||||
subject to the Neumann boundary condition. Here , , and are the diffusion rates for the susceptible, infective and removed individuals. Studying a time delay to account for the latent period on the spread of the disease, we have to consider the following model:
(16) | ||||
where the kernel function describes the interaction between the infective and the susceptible individuals at location and the present , which occurred at location and at earlier instance . This kernel function satisfies some conditions which are mentioned in [119].
The nonlocal effects and time delay may come in the model when the mature death and diffusion rates are age-independent. To derive such a delay model, we follow the work [131] where the author considered a single-species population model with two age classes and a fixed maturation period living in a spatial transport field. Suppose is the population density at a spatial point and time with age . Following [131], the single-species model given by
(17) |
with the natural boundary condition. Here, and are the diffusion and death rates at the age , respectively, and is the transport velocity of the field. For simplicity, we can assume that the population has two age stages: immature and mature. We also assume that is the maturation time and is the life limit of an individual species. Then, the total matured population density is given by and the equation (17) can be transformed into [131]:
(18) |
where .
2.10 Nonlocal problems and conservation laws
Nonlocal problems and conservation laws are particularly relevant in modelling biological transport and reaction-diffusion processes. They describe the movement of substances or entities within biological systems and the interactions between different components. Based on the mass conservation law, many mathematical models have been studied in cellular populations [132]. For example, if and are the density and flux of a population, then the conservation equation is given by
(19) |
An appropriate choice of flux helps in capturing the different biological phenomena. As an example, the flux can be divided into the random motion () and the adhesion (), i.e.,
We assume Fick’s law for the diffusive flux, i.e., . On the other hand, following Armstrong et al. [133], the adhesion flux is proportional to the population density and adhesion force. It is inversely proportional to the cell size, so
where is the proportionality constant, is the adhesion force, and is the cell size. Using Stoke’s law, the total adhesion force is given by
where and represent the nature of the force and its direction, respectively. Taking all these factors in the conservation equation (19), we obtain
(20) |
where
In [134], authors have considered the nonlocal model (20) with an additional term (logistic growth) in the reaction kinetics. They derived sufficient conditions for the boundedness of the solutions, but these conditions do not satisfy numerically for some parameter values, and hence, there are still some mathematical challenges.
2.11 Nonlocal variational problems
In traditional variational problems, the goal is to find an extremum of a function that depends on local derivatives of a function. Nonlocal variational problems are mathematical optimization problems that involve nonlocal operators in their formulations. These formulations have been used to derive and study nonlocal PDEs in diverse physical and biological systems. The general form of a nonlocal variational problem can be expressed as follows:
(21) |
subject to boundary conditions and constraints on the function over the domain . Here, the function is the nonlocal kernel that characterizes the interaction between the points and in the domain , and represents the unknown function being optimized.
Nonlocal mathematical model also arises from crop-raiding of large-bodied mammals living in the biodiversity-rich tropics [135]. Let be a spatial domain with and be the population density of the mammal at position and time . Here, we assume that the forest is safe for the mammal species but is of poor resources, while the farm has rich resources but is dangerous. Furthermore, mammals cannot survive if they only stay in the forest and do not attempt to go out to search for food; they cannot produce offspring on the farm because it is not a safe place for reproduction. In this case, the model takes the form [135]:
(22) |
with Dirichlet boundary condition on and positive initial condition. Here, and is the characteristic function of , which is defined by
The parameter is the diffusivity, and takes into account the over-crowding effects of the population in . The non-negative steady-states for the model (22) are the nonnegative solutions of the semilinear nonlocal elliptic problem
A similar type of Kirchhoff-Carrier type equation boundary value problems studied in the literature [136]:
where , , is a non-negative function, and is a non-negative continuous function in . The conditions on and the other parameters are given in [136]. A weak solution to this problem is a function in a Hilbert space such that
Furthermore, the variational structure has derivative operator given by
Structure-preserving characteristics and variational integrators are fundamental notions in numerical analysis, particularly in the simulation of dynamical systems [137]. These approaches are intended to retain fundamental aspects of the underlying physical system, such as energy conservation, ensuring that the numerical solution closely resembles the genuine system’s behaviour over long time periods. These methodologies are used in a variety of scientific areas, ranging from celestial mechanics to molecular dynamics simulations.
Sometimes, the complete information of a system’s states may be inaccessible, but only partial information about the states is observable due to limitations in experimental techniques. In this case, observability is a critical aspect of partially observed dynamics, highlighting which parts of a system are accessible to measurement [138]. The reduction techniques focus on accounting for hidden variables and incorporating partial observations into the system’s modelling. Stochastic models and Bayesian inference are employed to handle uncertainties associated with partially observed dynamics, and these frameworks provide probabilistic representations of hidden states and update beliefs based on observed data.
2.12 Nonlocal models in pattern formations
Pattern analysis was essential to human survival and advancement in the past. In order to make sense of the world, ancient civilizations studied patterns in astronomy, agriculture, social behaviour, and nature. Seasonal trends and natural cycles were intimately related to agricultural operations. To keep the soil fertile and minimize depletion, farmers would rotate the crops they grew in a given field. Numerous ancient societies, like the Greeks, Egyptians, and Mesopotamians, depended on the yearly inundation of rivers like the Nile and Tigris-Euphrates to replenish the soil with nutrients and used astronomical patterns as a guide. Although the first agricultural communities probably lacked the sophisticated maps we have today, they did manage and plan their agricultural activities using simple spatial organizing techniques. For instance, the historic Indus Valley civilization metropolis of Mohenjo-Daro which dates to approximately 2600 BCE. Cuneiform tablets uncovered in ancient Mesopotamia, one of the first centres of civilization, date to approximately 2300 BCE and show primitive maps of land property.
History demonstrates that the time of agricultural activities was greatly influenced by the locations of the sun, moon, and stars. A Greek mathematician and astronomer, Hipparchus (190–120 BCE), is frequently acknowledged for having made some of the first attempts at star mapping. By mapping the stars using a coordinate system, he popularized the ideas of celestial longitude and latitude. Hipparchus’s suggestion of a method to measure the apparent brightness of stars is one of his most important contributions. Babylonian mathematicians also investigated natural numerical patterns. Pythagorean triples are listed on the Plimpton 322 clay tablet from ancient Babylonia, which dates to approximately 1800 BCE and illustrates mathematical patterns in ancient times. In addition, traditional medical professionals and healers examined trends in disease and symptomology. They helped to shape the early forms of herbal medicine and other medical practices by observing the impact of specific plants or ceremonies on health. Ancient civilizations didn’t have the advanced technology that we use today, but they did develop their own methodologies to understand the world. Their models may not have been explicitly nonlocal in the way we think about it today, but they certainly reflected an understanding of interconnectedness and patterns in the world.
Nonlocal interactions in ecological systems can have a significant impact on spatiotemporal pattern formation, e.g., the development of spatial patterns in plants. Nonlocal interactions between plants, such as resource competition or facilitation, can result in the creation of regular patterns such as stripes, spots, or waves. These patterns frequently emerge as a result of self-organization in which interactions between individuals on a broader scale give rise to organized patterns on a landscape level. Nonlocal interactions in predator-prey relationships can result in the development of predator fronts, in which predators pursue prey concentrations over longer distances, altering the spatial dynamics of both populations. The nonlocal predator-prey interactions are generally two types: intra- and inter-specific. First, we consider a general nonlocal prey-predator model with nonlocal interaction in the intra-specific prey competition in a two-species population as
(23) | ||||
subjected to non-negative initial conditions and appropriate boundary conditions of prey () and predator () populations. The parameters and are intrinsic growth rate and environmental carrying capacity, respectively, and is the conversion efficiency from prey biomass into predator biomass. If , then there is no interaction between the species. For simplicity, we have considered a one-dimensional spatial domain , and and are the self-diffusion coefficients. As defined earlier, is the convolution term. The kernel function satisfies all the assumptions mentioned earlier, i.e., normalized, and has compact support in . For an unbiased movement of the species in both spatial directions, we assume as an even function. Still, sometimes, species do not have the same area for nonlocal consumption of resources in both spatial directions. This generally happens for a bounded spatial domain, e.g., studying a nonlocal interaction for the populations living in a river [46, 139, 140]. The function is called a functional response, and it satisfies three conditions [141, 142]: (i) , (ii) is an increasing function and (iii) there exists a finite such that . Many biologically relevant functional responses are available in the literature, e.g., Holling type II and III, Ivlev function, etc. [141, 142, 143, 144]. The function represents the per capita death rate of the predator population [145]. In [76], authors have studied a particular form of the nonlocal model (23). Nevertheless, the local model corresponding to that nonlocal model does not produce any nonhomogeneous stationary pattern, but the nonlocal model does.
Researchers have also studied the pattern formation for nonlocal models with more than two species populations. Generally, the three components of the local or nonlocal model in ecology add another feature to the two-species model. It allows us to study the dynamics of the prey-predator model in the presence of an additional species. These three components of the model may be (a) food chain; (b) two predators–one prey; (c) one predator–two prey; (d) food chain with omnivory; and (e) food chain with cycle [146]. Autry et al. [147] have considered a three-species nonlocal RD model in a food chain system with ratio-dependent functional responses as:
(24) | ||||
where , , and represent the concentration of prey, predator, and super-predator, respectively. All the convolution terms are defined as before, and and are the kernel functions. Here, the prey and super-predator interact directly with the intermediate predator and only interact indirectly with the intermediate predator. Authors in [147] have studied two aspects of the nonlocality: C-type and P-type. The -type nonlocality occurs when the prey species competes with itself. This type of nonlocal interaction usually occurs due to the overlapping ranges of the species, e.g., extensive root systems or a shared water table in plant species. On the other hand, P-type stands for pest type, which arises when one species nonlocally interacts with the other species, and this nonlocal interaction only affects the encounter rate, which appears in the functional response term. In addition, one can consider the same type of nonlocal term in the functional response for the first and second equations to study the nonlocal effect of high-mobile intermediate predator species on the crops or prey .
In population biology, age structure models and pattern formation provide insights into the dynamics of populations and their structural changes over time. Age structure refers to the distribution of individuals in a population across different age groups, and understanding its patterns is crucial for demographic analysis and prediction. McKendrick and Von Foerster developed this concept [148, 149]. Suppose is the population at age and time . Following McKendrick - Von Foerster, the population satisfies the following equation [150]:
with the initial condition and the birth boundary condition:
where is the birth rate of the individuals which depends on the age of the adult population. Here, is the death rate of individuals. These types of age structure models often use population pyramids to represent the distribution of age groups in a population visually.
In pattern formation, morphogenesis is a process by which spatial patterns and structures arise during the development of organisms [151]. The creation of the various and complex forms found in organisms depends on this complex process. It involves a cascade of molecular and cellular processes that coordinate the orientation, polarity, and assembly of cells to generate distinct morphologies and configurations. Examples include (i) the development of an embryo into a fully formed organism, (ii) the differentiation process by which cells in developing organisms take on certain destinies and functions, and (iii) precise control of gene expression. The multidisciplinary study of morphogenesis aims to comprehend the fundamental processes that give rise to the astounding diversity of biological forms. It draws on the disciplines of genetics, developmental biology, and biophysics, among others.
Spatiotemporal patterns in epidemiology reveal the dynamic interplay of place, time, and disease distribution within populations. Environmental, social, and biological factors all have an impact on these patterns [152, 153]. Epidemics can follow seasonal trends, exhibit cyclic behaviour, or demonstrate irregular patterns driven by a variety of factors, such as host susceptibility and environmental conditions, which are referred to as temporal patterns. However, spatio-temporal models deal with many spatial heterogeneity factors, such as higher or lower incidence rates in certain areas [154].
Nonlocal models are essential for describing developing patterns in a variety of biological systems, especially when it comes to cell communication, cell adhesion, and bacterial aggregation. Cell adhesion models take into account distant adhesive forces, enabling cells to recognize and respond to the spatial distribution of adhesion molecules [133]. It can capture the collective behaviour of bacteria by addressing long-range interactions, such as quorum sensing, where bacterial cells communicate and coordinate their activities across longer distances [155].
Nonlocal models derived from quantum confinement are intriguing in characterizing pattern generation at the nanoscale and have several applications in materials research, quantum mechanics, and device manufacturing. Quantum confinement is the phenomenon in which the electronic and optical characteristics of materials are significantly affected by their size, particularly when limited to dimensions equivalent to electrons’ characteristic length scale [156]. The nonlocal models derived from quantum mechanics are frequently used to characterize the electrical and optical behaviour of quantum dots, nanowires, and other nanostructures [157, 158]. The discrete energy levels and wave functions of confined electrons produce distinct patterns in their characteristics. Quantum dot solar cells, light-emitting diodes, and quantum dot transistors are some of the uses [159, 160]. Nonlocal models can assist in explaining the development of energy bands and electronic patterns in quantum dot arrays, which influence their optical and electrical characteristics [161]. Furthermore, quantum confinement can cause nonlocal electron interactions and transport behaviours, affecting the operation of nanoelectronic devices such as sensors, catalysis, and quantum computing.
An interesting perspective on the emergence of complex patterns in many physical and biological systems may be gained from nonlocal models that describe pattern development resulting from symmetry-breaking processes [162, 163]. Symmetry-breaking is a basic idea in which complex patterns are formed when a system changes from a symmetrical to an asymmetrical state. These occurrences, prompted by disturbances or outside factors, start to establish patterns. Fluid dynamics, chemical reactions, and biological processes are examples of systems where this may happen [164, 165, 166, 167, 168].
2.13 Complex nonlocal systems, multi-stability, and control
Nonlocal interactions enhance the species’ coexistence in the Lotka-Volterra competition model, and it supports how two competing species can coexist in the same resource [169]. Different mechanisms have been proposed to explain such coexistence in ecological communities with the competitional environment [170, 171, 172, 173, 174]. Authors in [175] proposed a nonlocal competition model as
(25) | ||||
subjected to non-negative initial conditions and appropriate boundary conditions. The first term on the right-hand side of each equation represents the dispersal of the species at rate (). For the species (), is the intrinsic growth rate, () is the coefficient corresponding to the local competition, and is the environmental carrying capacity. The parameters represent the intensity of nonlocal competition with the same species and its competitor. is the average density of all -individuals interact with the individual in a neighbourhood centred at . For spatial isotropy, is:
where is a kernel function and represents the influence of -individuals on the -individual when they are at a distance [4]. In this case, a normalized top-hat kernel function can be considered, and the authors in [175] presented differently to incorporate spatial scales. For two species, it is given by:
where is the interaction range and is a function of the species-specific ranges of competition, and . Depending on these spatial scales and , two possibilities can occur: additive and non-additive influence ranges. For the additive influence ranges, both the ranges of the competition overlap with each other [176]. In this case, the range of interspecific competition is , and the ranges of intra-specific competitions are and . This leads to a change in the kernel function (, = , and = ). On the other hand, for non-overlapping ranges of competitions [177, 178], the kernel function remains the same for inter- and intra-specific competitions (, , = , and = ).
A mixed hyperbolic-parabolic problem is studied in the prey-predator model in accounting for the flow of predators’ direction [179]. We consider the mathematical problem as
(26) | ||||
where and are the prey and predator densities, respectively, at the position and time . Here, the term represents the flow preferred to predators’ direction, and the velocity function is generally nonlocal and nonlinear. A typical choice is [179]:
Here, the denominator is the normalization factor. Prey species spread in all directions in this model, but predators have a direct movement that migrates towards higher prey density zones. Furthermore, the radius of support of specifies how far predators can detect the presence of prey and, as a result, the direction in which they move.
Bio-cells participate in complex, dynamic interactions encompassing various molecular, cellular, and tissue activities. These interactions are essential for living things to operate normally and have significance in several physiological and pathological situations. Cells, for example, communicate using complex signalling networks. Hormones, growth factors, and neurotransmitters connect to cell surface receptors, triggering a chain reaction of events within the cell [180]. Several approaches are used to simulate and model these cellular processes, including metabolism. In flux balance analysis, we operate the cellular processes under steady-state conditions and use constraints based on mass balances, thermodynamics, and other factors to predict metabolic flux distributions [181]. The kinetic model involves individual reactions with kinetic reactions represented by ordinary or partial differential equations and studying how the concentrations change over time. In the cellular automata model, each cell follows some rules governing its interactions, and these rules determine its state, reflecting biological behaviours. In addition, agent-based models simulate individual agents (cells or molecules) and their interactions and help in studying emergent properties and spatial considerations.
Components of complex systems interact in sophisticated ways, and their behaviours tend to be nonlocal. Nonlocal interaction models can assist in describing how a change in one section of the system affects the entire network. Tsallis entropy, in contrast to the standard Shannon entropy, is a non-extensive entropy that considers long-range correlations in a system. It has been used to account for nonlocal interactions and power-law distributions in many domains, including statistical mechanics and information theory. Moreover, nonlocal models bridge the gap between multiple scales, like zooming in from the cosmic scale to the quantum scale, seamlessly connecting the vastness of the universe to the tiniest building blocks of matter.
Nonlocal PDEs with nonlinear diffusion terms are effective mathematical tools for understanding nonlocal interactions and complex diffusion processes. These equations extend typical diffusion models by taking into account impacts from distant locations. Nonlocal PDEs with nonlinear diffusion are used to represent developed patterns in biological systems, such as population dispersion or the generation of spatial patterns in ecosystems. Complexity and pattern production in biophysical systems is a diverse field that spans several scales, from molecular interactions to tissue and organism-level structures [182]. Furthermore, microbial systems are exceptionally diversified and complex, ranging from intricate interactions within microbial communities to involvement in environmental processes and human health [183].
The modelling of many-particle systems is also a complex task that has applications in physics, chemistry, biology, and a variety of other sciences. Newton’s equations of motion are frequently used in classical physics to describe the motion of particles in a many-body system [184]. In addition, statistical mechanics gives a statistical description of a vast number of particles [185]. In kinetic theory, mathematical models involve the construction of equations that explain particle distribution and behaviour. Furthermore, network and graph-based models give a solid foundation for understanding the structure, dynamics, and behaviour of complex interactions in a variety of systems [186, 187, 188].
Self-organized criticality (SOC) has been studied in a variety of disciplines, including evolutionary biology and dynamic models with complex relationships [189, 190, 191, 152]. SOC refers to the tendency of complex systems to grow towards a critical state in which minor events can lead to large-scale cascades and emergent behaviour, e.g., in the forest-fire model [192], in the brain [193], etc. Complex systems naturally evolve to a critical state, and SOC provides a valuable framework for understanding the dynamics of evolutionary and complex interactive processes.
Complex systems comprise a large number of linked components with nonlinear interactions, which frequently results in emergent phenomena that cannot be easily derived from individual components. When just a subset of the system’s variables or states are available for observation, it introduces uncertainty in precisely understanding and forecasting the system’s behaviour [194]. The integration of these concepts is critical for acquiring insights into real-life occurrences that are characterized by both partial observations and complex interactions. Modelling such systems is an interdisciplinary process that requires an understanding of mathematics, statistics, and the specific application domain [195, 196].
Control problems involving human variables are common in many fields, including automation, transportation, and healthcare, where humans interact with complex systems. These systems incorporate human factors that examine cognitive, perceptual, and physical elements of human interaction with technology [197]. The objective is to create systems that take into account human skills, limits, and behaviours, maximizing performance and reducing errors. Additionally, these models are used in neurorehabilitation and robotics to combine muscle mechanics and control, which leads logically to planning and behaviour [198].
Nonlocal high-order connectivity and interactions are the studies of long-distance effects and correlations between distant locations in a system, with an emphasis on higher-order links beyond close neighbours. This notion is especially important in a wide range of scientific areas, from physics and materials science to neurology and complex systems analysis [199, 200]. Exploration of nonlocal high-order connectivity in the context of neurodegenerative diseases has become increasingly important in understanding the complex dynamics of brain function, cognition, information processing, and the progression of conditions such as Alzheimer’s, Parkinson’s, and others [106, 201].
2.14 Nonlocal models in mechanobiology and biomechanics
Nonlocal models are essential in mechanobiology and biomechanics for capturing the spatial and temporal aspects of mechanical interactions in biological tissues. These models provide a more comprehensive and realistic representation of mechanical phenomena, offering valuable insights for both research and medical applications. For instance, (i) how mechanical signals are transmitted within cells and tissues, (ii) the influence of mechanical forces on cells and extracellular matrix components, considering the nonlocal effects of stress and strain distribution, (iii) blood vessel mechanics and the effects of blood flow on vessel walls, etc.
Nonlocal beam models have been applied in various engineering and mechanical systems to study the behaviour of slender structures and address challenges that classical local beam theories cannot adequately capture [202, 203, 204]. They have found applications in various engineering and physics fields, where long-range interactions and size effects influence the behaviour of beams. For instance, bridge-based sensors and actuators have many applications in biological sciences [51, 52, 53]. The outcome of these devices depends on their dynamic properties of beamlike elements, which can be improved by studying their micro- or nano-electromechanical system (MEMS or NEMS) structures [53]. A set of integro-differential equations can describe the general nonlocal continuum theory, and different kernel functions have been used in the model to incorporate different problems [50]. For example, the equation of motion in nonlocal elasticity theory is given by
(27) |
where and are the mass density and the applied body forces, respectively. For a linear homogeneous elastic solid, the constitutive equations in nonlocal elasticity theory can be written as an integral over the body as [53, 50, 205]:
(28) |
where and are the stress tensors of nonlocal and local elasticities at the spatial points and , respectively, and
represents the conventional constitutive relations for an isotropic elastic material with as the strain tensor and as the displacement vector. The parameters and are material constants. The function is called the kernel function, which characterizes the amount of stress at a material point influenced by the strains of all other points in the body.
The classical continuum models cannot go sufficiently on smaller scales, which are the main part of nanotechnology. Atomic and molecular models can solve these smaller-scale problems but are computationally intensive. However, the nonlocal continuum models can take care of smaller length scales. For instance, in equation (28), if is the Green’s function of a linear differential operator : , and is a differential operator with constant coefficients, one can obtain . In this case, the integro-differential equation (27) reduces to the partial differential equation
The operator is a differential operator for a two-dimensional kernel function satisfying the Green’s function [205, 206], and in this case, the constitutive relations simplified to
(29) |
Researchers have been studying different nonlocal beam models to incorporate different issues, e.g., the nonlocal Timoshenko and Euler beam models [53, 207, 208, 209, 210, 211]. Flexoelectricity is one of the issues where an electromechanical coupling happens between the polarization and the strain gradient, and these flexoelectric materials play a vital role in making nanoscale sensors, actuators and energy harvesters [212, 213]. Moreover, the nonlocal elasticity theory helps in capturing the long-range interactions and the strain gradient stress of these flexoelectric nanosensors. Taking the nonlocal elasticity theory, the stress and electric displacement tensors as [213, 214, 215]:
(30) | ||||
where and are the normal and higher-order stress tensors, respectively; is the electric displacement vector; is the electric field. All the tensors’ expressions are mentioned in [213] and the references therein. Using these equations, authors have derived a cantilever beam model for the flexoelectric sensor with external loads. Motezaker and his coauthors constructed a sandwich-type nanostructure from a nanoplate covered by two smart layers under the externally applied voltage [216]. They have considered surface higher-order nonlocal piezoelasticity theory as:
(31) | ||||
where and are the nonlocal parameters; and surface stress tensor and electric displacement vector, respectively; the remaining terms are mentioned in [216] and the references therein. Using this higher-order nonlocal model, researchers have shown a decrease in the frequency and bucking load and an increase in the deflection by enhancing the nonlocal parameter [216]. The opposite happens by applying the negative external voltage.
Nonlocal plate theory is used to evaluate the axisymmetric bending of micro/nanoscale circular plates, accounting for the impact of small-scale influences [217]. It is especially pertinent at the micro/nanoscale, where traditional plate theories would not be able to adequately predict the behaviour, as it takes into account the nonlocal effects resulting from the tiny size of the structure. Furthermore, pyroelectricity’s impact on thermally produced vibrations in piezothermoelastic plates is a complex, multidisciplinary issue. To understand the behaviour of such linked systems, researchers frequently employ experimental validation together with numerical models [218]. Variational principles provide a strong and systematic technique for developing the governing equations of motion for piezoelectric, thermopiezoelectric, and hygrothermopiezoelectric materials [219]. These concepts are founded on the notion of minimizing or extremizing a certain functional, typically referred to as the total potential energy or the total Lagrangian, with regard to the relevant field variables.
Sometimes, the distances between adjacent metallic structures in a metasurface might get extremely small (near the nanoscale), and in these situations, the classical local response might not be sufficient when taking the spatially independent material characteristics into account. This is due to the quantum nature of the electron gas in metals at such small scales. Such circumstances can be handled via nonlocal effects by adjustments to the resonance frequencies, damping rates, and dispersion relations of the plasmonic modes. This behaviour differs from traditional predictions, especially as the gap size reduces due to the increased prominence of nonlocal influences. Nonlocal effects in plasmonic metasurfaces with nearly contacting surfaces include shifts in resonance frequencies, changes in field enhancement, and changes in near-field distribution [220]. These effects are critical for applications such as sensing, imaging, and improved light-matter interactions.
Nonlinear viscoelastic solids refer to materials that exhibit both time-dependent and strain-dependent behaviour under the influence of applied stress or deformation [221]. In this case, the constitutive equations governing the behaviour of nonlinear viscoelastic solids often involve time-dependent and strain-dependent terms [222]. A common representation is through a stress-strain relationship that includes both elastic and viscoelastic components and where the material properties are functions of time and strain. This helps us predict the performance and durability of materials in real-world applications. In addition, studying the thermoelastic behaviour along with viscoelastic solids gives us the experience of stress under the influence of both thermal and mechanical loads [223, 224].
2.15 Peridynamics, fracture and damage problems, multiscale and multiphysics analysis
Peridynamics is a nonlocal theory that has gained popularity in recent years due to its applicability in multiscale and multiphysics research. It is especially effective for modelling materials and structures having discontinuities, such as cracks and fractures, and it provides a framework for considering long-range interactions [59]. Arguably, the first paper on peridynamics was published in 2000, and the author discussed the models’ discontinuities and long-range forces using a constitutive relation based on pairwise interactions between particles [60]. It is being used to capture biological material in fracture, e.g., bone fracture [57, 225]. Here, we describe the basic formulation of peridynamics at a spatial point and time . Similar to the neighbourhood of a spatial point for nonlocal models, we consider a horizon of size as
Depending on the dimension of the spatial domain, the shape of the horizon is different, e.g., in one-dimension is an open interval ; in two dimensions, it is a circular region of radius centred at , etc. In addition, the dual horizon of is defined as the union of points whose horizons include , i.e., . The equation of motion is formulated as an integral of interaction forces between points on the spatial domain (body) . Following the balance of linear momentum, we obtain [59]:
where is the density, is the acceleration of the displacement vector , is the relative displacement vector, is the bond vector between and , is the force density vector per volume acting on particle due to particle , and is the body force. Here, the first integration contributes the direct force term acting on the point , and the second integration contributes the reaction force term. The discrete form of the balance of linear momentum can be obtained by replacing the integrals with summations [59]. The equation for force density is based on ordinary state-based peridynamics and is a function of collective deformation [226]. In computing the force density vectors for different problems, we refer the reader to the peridynamics literature [40, 227, 228] and the references therein.
Investigating damage problems, particularly in the context of materials with flexoelectricity, adds an additional layer of complexity to the analysis. Flexoelectricity refers to the coupling between strain gradients and electric polarization, and its consideration is crucial for understanding the behaviour of certain materials. The peridynamics formulation for flexoelectricity gives insight into how this nonlocal theory could be developed to incorporate the effects of flexoelectric coupling in materials [229]. Many materials have structures on several length scales, and the structural hierarchy can play a significant role in defining bulk material characteristics [230, 231]. Furthermore, different stages and challenges have to be faced in understanding and utilizing the flexoelectricity in materials [232]. In addition, nonlocal continuum mechanics models are critical for capturing the impacts of long-range interactions and resolving concerns such as material failure, damage, and scale effects. Eringen introduced nonlocal elasticity and gave answers to particular situations such as screw dislocations and surface waves [205]. Nonlocal models account for material inhomogeneities, as well as the effect of gradients in the localization of deformation and fracture [97, 233, 234].
2.16 Nonlocal boundary and initial conditions and their approximations
Along with the nonlocal model, researchers have used mathematical models with nonlocal boundary and initial conditions [235, 236, 237], and they play a crucial role in the field of mathematical biology. These conditions can capture the influence of interactions extended beyond the immediate neighbours of many biological processes. For instance, it could represent (i) the migration of species into or out of the study area in ecological models, (ii) the impact of neighbouring cells or tissues at the boundaries of a simulated domain, (iii) the impact of external factors on the initial distribution of a disease when the introduction of the disease happens from outside the modelled region, etc. Here, we first consider a hyperbolic integro-differential equation that models the quasistatic flexure of a thermoelastic rod as [236]:
with the initial conditions , for and the nonlocal conditions
where , and are the given functions, is a positive constant, and is a suitable defined function that satisfies some conditions [236]. This is an example of a nonlocal boundary conditions problem, as the boundary conditions involve all the points in the spatial domain . Now, we move to the notion of nonlocal initial value problems. We consider a general mathematical model in a bounded domain [238]:
where is a parabolic operator with continuous and bounded coefficients.
2.17 Physics-informed neural networks
Physics-informed neural networks offer a reliable technique which combines physics concepts with the flexibility and learning capabilities of neural networks. These models tend to be useful for tackling complex physical problems when obtaining analytical solutions may be difficult or impossible to achieve. This technique can solve physics-based partial differential equations with the help of neural network architecture. It consists of two main components: a neural network and a loss function. The neural network parameterizes the solution to the problem, while the loss function ensures that the solution is close to the governing physics equations. Here, we describe a general methodology to deal with such problems. Let us consider a nonlinear partial differential equation in [239]:
(32) |
where is the hidden solution and is a nonlinear differential operator. Now we define and proceed by using a deep neural network to approximate . The common parameters of the neural networks and can be trained by reducing the mean squared error loss:
where are the initial and boundary training data on and ate the collocations points for . If we apply this methodology to Navier-Stokes equations in two dimensions, we obtain the mean squared error (MSE) loss function as [239]:
where and with as the pressure and and are the unknown parameters.
2.18 Modelling nonequilibrium phenomena and processes with nonlocal models
Using nonlocal models to study nonequilibrium phenomena adds an intriguing dimension to understanding dynamic processes due to the interaction over long distances. Traditional equilibrium models assume that systems are in a stable state, but many real-world situations involve constant change and flux. In the context of nonequilibrium phenomena, nonlocal models can be applied to various fields, such as physics, fluid dynamics, and materials science. Nonlocal models can describe the behaviour of particles and waves in systems that deviate from equilibrium. For instance, they can be used to study the transport of heat or charge in materials with non-uniform structures. Here, we describe a nonlocal model of an electron-hole semiconductor plasma, which accounts for the nonequilibrium phenomena. An electron system’s electro-hydrodynamic model is commonly expressed as [240, 241]:
(33) |
where , , , , and . Here, is the electron concentration, is their average velocity, is the energy density, is the effective electric strain, is the effective electron mass, is the electron temperature given in energetic units, and is the heat flow. The simplified model of this can be investigated mathematically by developing drift-diffusion models; however, they are incompatible with technological improvements. In [241], the authors reduced the computational cost with the help of normalization and described a number of non-stationary physical phenomena in semiconductor devices, including carrier heating and velocity overshoot. This reduced model also accounts for the nonequilibrium and nonlocal character of electron-hole semiconductor plasma.
2.19 Nonlocal many-particle systems with AI and machine learning
Nonlocal interactions in multi-body systems extend beyond the immediate neighbours of individual bodies because multiple species evolve in an ecosystem and interact with themselves and others. For instance, species sense their surroundings to make decisions, e.g., the predator finds the prey, the prey avoids the predator, and the aggregation in swarms, called nonlocal sensing [42, 43, 242]. This nonlocal sensing happens on different scales, affecting populations’ spatial distributions leading to species aggregation, segregation, or complex patterns [243, 244, 245, 246]. Researchers have studied these kinds of biological problems mathematically by aggregation-diffusion equation [247, 248, 249]. For a single species model, it leads to the following form:
(34) |
where is a positive integer. This model can generate a non-uniform stationary pattern consisting of single or multiple patches with various shapes and sizes [250, 251]. A generalization of the aggregation-diffusion equation (34) for multi-species populations is [247]:
(35) |
where are the densities of populations at the spatial location and at time . Here, is the diffusion coefficient of the population and are constants that denote the attractive or repulsive tendencies (depending on its sign) of the population to the population . Here, births and deaths have been neglected in the model because many animals make their spatial arrangement on shorter time scales. Authors in [252] studied the model (35) for with the top-hat kernel function and incorporated the detection behaviour of the populations distributed over habitat in animal ecosystems. They have explained the detection in various forms, e.g., direct observations of the individuals at a distance, indirect communication between individuals via marking the environment, and the memory of past interactions with other populations [247, 252].
Nonlocal models for crowd dynamics come from the study of many-body issues, gaining influence from the Boltzmann model and growing within a hierarchy of mathematical models [253]. The Boltzmann model is a core model for understanding many-body systems and offers a platform for extending notions to crowd dynamics. In addition, for the many-body problem, each individual’s behaviour impacts and is impacted by the activities of others. Traditional models frequently focus on local interactions, but nonlocal models incorporate effects throughout the entire population. Due to the complexities of real-world events, validating and calibrating nonlocal models for crowd dynamics is not an easy task.
Data-driven nonlocal models in biology are an exciting intersection of computational methods and biological research [254]. These models leverage data to understand and simulate complex biological systems, considering interactions that occur over long distances. They can be applied to study phenomena like the spread of diseases, signalling pathways in cells, or ecological interactions in a community. By incorporating data into these models, researchers can gain a more comprehensive understanding of the underlying processes and make predictions based on real-world observations.
Data-driven nonlocal models are effective tools for solving a variety of inverse issues in a range of scientific fields [255]. When compared to conventional approaches, they enable more robust and accurate solutions to inverse issues by utilizing the knowledge found in nonlocal relationships within the data. These models are highly effective at reconstructing high-quality images from noisy or partial data in computer vision and medical imaging [256]. They improve reconstruction accuracy by accounting for nonlocal similarities between image patches. In addition, the nonlocal technique in signal processing makes it possible to recover signals from measurements that are undersampled or distorted more effectively. The goal of various ongoing research projects is to create effective algorithms to deal with these problems. Among them is the Bayesian approach, which offers a probabilistic framework for quantifying uncertainty that combines known information with empirical data in an easy-to-use manner [257]. Instead of treating model parameters as fixed values, it treats them as probability distributions. The posterior distribution is then obtained by applying Bayes’ theorem to update the prior distribution of beliefs and combine it with the likelihood of observed data. Because algorithms take uncertainty into account, Bayesian models are naturally resilient to small amounts of data. This is especially useful in situations when acquiring huge datasets is difficult.
AI has revolutionized all fields, including biology, and helps analyze and interpret the vast amount of biological data used to develop nonlocal models. This includes tasks such as learning, reasoning, problem-solving, perception, and language understanding. On the other hand, the generative models learn the underlying patterns and structures of the data and can then create new samples that share similar characteristics with the help of machine learning or deep learning algorithms. In addition, these models provide an emerging collection of tools with enhanced characteristics for recreating segregated and whole-brain dynamics [258]. Furthermore, generative models in AI and learning processes are based on non-equilibrium dynamics [259].
There are several types of machine learning algorithms available in the literature, which may be generally classified into three categories: supervised learning, unsupervised learning, and reinforcement learning [254]. In supervised learning, the algorithm is trained using a labelled dataset to identify the mapping function from inputs to outputs, which allows the algorithm to generate predictions or classifications on previously unknown data. In the case of unsupervised learning, the algorithm searches for patterns, correlations, or structures in the data. Agent learning algorithms are used in reinforcement learning to make decisions by interacting with the environment. The agent receives feedback in the form of benefits based on the behaviours it takes. Here, we describe a data-driven technique using an optimization-based methodology to learn nonlocal constitutive laws for stress wave propagation models. For this, we consider a high-fidelity model in a domain [260]:
subject to the boundary conditions . The operator is a high-fidelity operator, e.g., differential or integral operator, and is the forcing term. Suppose the solution to this high-fidelity problem can be approximated by the solution to the nonlocal model:
with the boundary condition where is an appropriate nonlocal interaction domain and is the corresponding nonlocal interaction operator specifying a volume constraint [260]. Here, is a nonlocal operator defined by . To learn the kernel , we assume that pairs of values are given for the forcing terms and the high-fidelity solutions . In this setup, the goal is to optimize the following problem
where an appropriate norm over . Authors in [260] described a detailed algorithm to optimize this problem. In addition, this type of methodology can also be applied to hyperbolic problems.
2.20 Multiscale and multifidelity models
In computational science and engineering, various multilevel methods have been applied to mathematical models, such as multigrid for solving systems of equations, multilevel Monte Carlo and multilevel stochastic collocation for estimating mean solutions of partial differential equations with stochastic parameters, and so on. The common approach is the use of surrogate models, which are simplified models trained on a combination of high and low-fidelity data. These surrogate models can then be used to quickly approximate solutions to the nonlocal models. In these techniques, a parameter is involved and controls the trade-off between error and computational costs. Here, we first describe the Monte Carlo method for a general problem to determine approximate statistical information of the high-fidelity model with low-fidelity surrogate models [261].
Let be a function for the source of information, where for some and . Here, we consider the high-fidelity model as the “truth” model and the low-fidelity models as surrogate models. For , we assume the costs of evaluating each of the models are . For the Monte Carlo method, the authors in [261] draw independent and identically distributed (i.i.d) realizations of the random variable , where is a sample space, and estimated by
Now, for , this Monte Carlo estimator is an unbiased estimator of , and if the variance of is finite, then the MSE of the estimator with respect to is
and the cost of computing the Monte Carlo estimator is In this case, our goal is to estimate the expectation with realizations of the random variable as inputs.
The authors in [261] showed the MSE for the multifidelity Monte Carlo (MFMC) method is lower than the Monte Carlo estimator with the same computational cost. The authors considered number of i.i.d realizations for the models , where and they satisfy . In this case, the MFMC estimates
where are the weights for the differences of the Monte Carlo estimators and , . This MFMC method can be applied to get a lower cost without compromising accuracy for the steady-state nonlocal diffusion model [115]:
(36) | ||||
where , for a length scale and , , and are defined on , , and , respectively.
Here, data resolution is essential to data-driven models, impacting their accuracy, interpretability, and application. Low-resolution data is often more aggregated or sparse and may not capture slight changes in the underlying phenomenon. In this situation, models trained on low-resolution data may oversimplify complicated connections, resulting in restricted prediction ability and missing critical details. High-resolution data, on the other hand, offers extensive information, catching nuanced patterns and variations within the dataset, which can produce more accurate forecasts and identify subtle linkages. They may, however, be more computationally intensive and prone to overfitting if not appropriately managed. Despite limitations on low-resolution data, it can still be useful, particularly in situations where high-resolution data is impracticable or prohibitively expensive to gather. It is frequently utilized in large-scale environmental monitoring, satellite image processing, and some healthcare applications.
3 Applications of Nonlocal Models in Life and Health Sciences
Nonlocal models find diverse applications in life and health sciences, offering a valuable framework for capturing spatial and temporal interactions that extend beyond immediate neighbours. These key applications include (i) the intraspecific competition between individuals for accessing food resources, (ii) the spatial spread of infectious diseases, (iii) tumor growth, considering the influence of nonlocal interactions on the proliferation and migration of cancer cells, (iv) spread of neural activity and the interactions between distant brain regions, (v) predicting tissue repair dynamics and optimizing regenerative medicine approaches, (vi) health informatics by predicting disease outcomes, analyzing medical images, and identifying patterns in health data, etc.
3.1 Ecology and epidemiology
The classical Fisher-KPP model and its extensions have been used in many applications, including cell biology, high energy physics, statistical physics, chemistry, ecology, and epidemiology [262]. Along with the Fisher-KPP model, different types of nonlocal models have been discussed in this article, and we have summarised their applications in this subsection.
In ecological systems, individuals within a population often interact nonlocally due to resource competition, predator-prey interactions, or spatial dispersal. Nonlocal models have been applied to study population dynamics, species coexistence, and spatial patterns in ecological communities. The classical Fisher-KPP equation and its extensions describe the space-time evolution of population densities [70, 71, 263, 264]. The nonlocal Fisher-KPP equation (3) is called the “competitive Lotka-Volterra model” [265, 266, 267]. It is a simple nonlocal model with many applications, e.g., nonlocal intra-specific competition in the predator-prey model [74, 76, 78, 82, 85]. As mentioned earlier, the homogeneous solution can be unstable due to nonlocal interaction. For this, we linearize the nonlocal model (3) around the homogeneous solution , and then applying the Fourier transform on both sides, we obtain the eigenvalue equation
(37) |
where is the wave number and is the Fourier transform of the kernel function [62, 77]. If we choose the kernel function as the Dirac -function, then the nonlocal model (3) reduces to the local model (2), and the homogeneous solution becomes stable as for all positive and . The eigenvalue may not maintain the negative sign for the other choices of the kernel functions. For example, suppose is a top-hat kernel function [74, 268], then the eigenvalue equation (37) becomes
and it is not always negative for all ; rather can make positive for some by choosing some specific value of and [268]. For such choices of and , the homogeneous solution becomes unstable, and the nonlocal model produces a non-homogeneous stationary solution. This type of linear stability analysis around the non-trivial homogeneous solution(s) predicts the existence of heterogeneous solution(s) for the nonlocal model, and this method is known as Turing instability analysis [3]. This technique can be applied to the other nonlocal models described in this review article if the homogeneous solution satisfies the Turing instability conditions [4].
The considered nonlocal model with top-hat kernel function has important characteristics. For a fixed value of , we may find the critical values and by which holds for unique and , and holds for a range of values of with . However, these critical values do not exist for small values of as negative for approaches . Hence, (range of nonlocal interaction) requires a minimum value to unstable the homogeneous solution [74, 78]. In addition, two length scales can be identified in the presence of the top-hat kernel function: (i) the diffusion parameter as activation and (ii) the range of nonlocal interaction as inhibition. We can observe a Turing instability for (short-range activation and long-range inhibition), and it produces a Turing pattern [3, 34, 269]. On the other hand, for (long-range activation and short-range inhibition), travelling wavefront propagation can be observed. In particular, for , the nonlocal model reduces to the local classical Fisher-KPP equation and exhibits a travelling wave solution [4, 270]. The same type of behaviours can be observed for other truncated kernel functions (triangular, parabolic, etc.), but the minimum range of the nonlocal interaction varies for different functions [78].
In plant communities, the local competition term could represent the competition for light, assuming the canopy size is negligible compared to the range of the root system [175]. If the opposite holds, nonlocal competition comes into the picture [178, 271]. In this case, individuals compete to access the resources, which can redistribute itself [41, 272]. In ecology, nonlocal models can capture many factors; e.g., Cantrell and Cosner [273] constructed a model for ladybirds feeding on aphids. They focused on the nonlocal RD model for aphid density in a particular patch that involves the whole population.
Another type of solution called ‘travelling wave solution’ is studied for a partial differential equation that propagates with a constant speed while maintaining its shape in space. These solutions represent wave-like patterns that propagate through space while maintaining their shape and speed. Travelling wave solutions are common in biology, and numerous models in population dynamics produce biological waves. In the context of population dynamics, the travelling wave manifests itself as a wave of change in population density through a habitat, e.g., a plague that travels through a continent. This travelling wave solution also signifies the invasion of the species over the habitat. The travelling wave solutions have been studied for the nonlocal models, e.g., let us consider an extension of the nonlocal FKPP model (3) as [274]:
(38) |
with “thin-tailed” kernel functions which are even, satisfies the normalized condition and as . All the parameters involved in the equation (38) are positive and satisfy .
The initial condition plays a crucial role in finding the travelling wave solutions. A small population is introduced in a localized space and is considered the initial condition for finding the travelling wave solutions. In addition, the boundary conditions for this nonlocal model are considered as and for [274]. For the “thin-tailed” kernel function , the nonlocal model (38) can be converted to the coupled equations [274]:
(39) | ||||
with localized initial conditions for the species and boundary conditions , , , and for [274]. Sometimes, this conversion technique can be applied to the nonlocal model with space-time nonlocality [78], e.g., the single species model considered in (5). Along with travelling wave solutions, periodic travelling waves (or wavetrain) are also observed in local and nonlocal models, which are the periodic solutions of travelling waves. These travelling wave solutions also signify the migration of two or more sub-populations.
The single species nonlocal model (4) in population dynamics was introduced by Britton [83, 84], and it is an advanced version of the local FKPP model as it can be obtained by considering as the delta function. The nonlocal model (4) includes local aggregation that takes care of animal grouping for protective measures against predation, which could arise for many reasons, such as grassland herds, schools of fish or flocks of birds. Sometimes, species take time to move from one position to another. In this case, the nonlocal model (5) containing a spatio-temporal average weighted toward the current time and position better fits these types of scenarios [84]. This nonlocal model accounts for the influence of past conditions on present ecological processes.
Nonlocal interactions are important in multi-body systems because each body’s behaviour is influenced by its nearby neighbours and bodies at a distance. Such interactions are common in a wide range of physical and biological systems, including granular materials, colloidal suspensions, and biomolecular systems. In the case of population biology, species sense their surroundings to make different decisions, called nonlocal sensing, and these happen on different scales [42, 43, 242]. This nonlocal sensing affects the spatial distributions of populations and leads to species aggregation, segregation, or complex patterns [243, 244, 245, 246]. Researchers have studied these kinds of biological problems mathematically by aggregation-diffusion equations (34) and (35) for single- and multi-species models, respectively. In addition, the nonlocal multi-species advection-diffusion model (35) can capture a wide variety of patterns [247, 252]. These types of models have been applied to prey-predator interactions [275], cell-sorting [276], and animal territoriality [277]. Authors in [247] showed that the inclusion of self-attractive terms causes oscillatory solutions for the two-species model, and a qualitative effect on patterns occurs due to a change in the width of the spatial average.
Nonlocal dispersal is critical in understanding population dynamics, species coexistence, and spatial patterns in ecological communities. Individuals or seeds moving over long distances can influence the colonization of new habitats, gene flow, and species interactions. This type of dispersal in biology is observed in various systems, including plants dispersing seeds, animals migrating across vast distances, and microorganisms spreading in heterogeneous environments. As researchers continue to investigate the consequences of nonlocal dispersal, it becomes apparent that it plays a pivotal role in ecological and evolutionary processes, shaping the distribution and persistence of life on Earth.
The nonlocal dispersal used in the model (8) is important for plants and animals. It characterizes the movements of organisms in a habitat. For plants, this nonlocal dispersal happens through the seed dispersal process. In the review article, Bullock et al. fitted 11 types of probability density functions as dispersal kernel functions for 144 plant species, and all of them are good fits to the grouped data sets [278]. In addition, the dispersal-competition models have been used in the integrodifference equations, which are discrete in time and continuous in space [279]. For instance, the integrodifference equations of a population size at time and position can have the form [279]:
where is the kernel function that satisfies the normality condition over the spatial domain . In the absence of dispersal, the growth equation is of the form . These models apply to the development and spread of seed-dispersed plants. Moreover, a similar model can be considered for the single-species annual plant model when seeds do not survive for more than one year [279]. In addition, the nonlocal dispersal is also applied to study the metapopulation dynamics. In [280], the author studied the effects of nonlocal dispersal on population persistence and the conservation of species in fragmented habitats where local populations are interconnected through dispersal, colonization, and extinction processes. It has implications for ecosystem resilience, invasive species management, and conservation biology. As research in ecology and population dynamics progresses, the study of nonlocal dispersal will continue to shed light on the intricate processes that shape biodiversity and ecological patterns.
In [281], Hastings et al. provide insights into the spatial spread of invasions, a specific example of nonlocal dispersal in ecology. The paper discusses theoretical developments and empirical evidence related to the spatial dynamics of invasive species, highlighting the significance of nonlocal dispersal in driving the spread of invasive populations. Furthermore, in [282], the authors delve into the role of diffusion in ecological problems. It covers various aspects of dispersal and diffusion in ecology, including nonlocal dispersal and its effects on population dynamics and spatial ecology. The book provides a comprehensive and interdisciplinary perspective on diffusion in ecological systems and is an excellent resource for those interested in applying nonlocal dispersal in biology.
These applications demonstrate the versatility of fractional nonlocal models in capturing the complexities of biological systems. Fractional calculus provides a powerful framework to describe anomalous transport, long-range interactions, and memory effects, offering valuable insights into various biological processes. For instance, fractional-order ordinary differential equations (FODEs) are used to study the memory effect on population growth or some inherent randomness at a microscopic level that regulates the macroscopic dynamics [283]. In ecology, FODEs have been studied in prey-predator models to account for the interactions of the population densities dependent on a certain time in the past [284, 285, 286]. The nonlocal FODE model (10) describes the emergence and evolution of biological species in the presence of memory. Furthermore, the fractional integral representation is used in the statistical thermodynamics of confined systems to obtain generalized transport equations, distribution functions, and correlation functions that take into account the particular characteristics of confinement-induced dynamics [287].
Maciel et al. introduced nonlocal terms in the competitive terms in the Lotka-Volterra competition model (25). They studied the effect of the range of nonlocal interaction on each species’ influence ranges [175]. In this case, we have two scenarios: additive and non-additive influence ranges. In the case of non-additive influence ranges, individuals affect competitors of the same or other species in a spatial range that depends only on the influence range of the individual itself. An application of this could be the allelopathic interactions between plants, in which the extension of the roots or branches determines the species’ influence range [177, 288, 289]. Another application could be the different types of antagonistic interactions established in microbial communities and governed by the release of chemicals into the environment [178, 290, 291]. On the other hand, for additive influence ranges, the ranges of the nonlocal interactions are a combination of the influence ranges of the species engaged in the interaction. This signifies that the plants compete for resources through their roots or home-ranging animals competing for forage over a finite region, such as central place foragers [292, 293].
The mixed hyperbolic-parabolic nonlocal model (26) has two important key features [179]. First, the prey moves in all directions due to the presence of Laplacian term, and predators move to regions with higher prey density. Second, the range of nonlocal interaction of nonlocal terms defines how far predators can “feel” the presence of prey, and they move accordingly.
Nonlocal epidemiological models have been used to study the spread of infectious diseases in regions with diverse population densities, mobility patterns, and environmental factors. These models consider the nonlocal interactions between individuals or populations across different spatial locations, providing insights into how the disease can propagate and persist in complex environments. Furthermore, these models account for long-range dispersal, human mobility, and spatial heterogeneity, providing a more realistic representation of disease dynamics in complex biological systems.
In the classical SIR model, it is assumed that the epidemic is in a homogeneous population [14]. But, generally, a disease in an epidemic spreads heterogeneously among individuals. So, a nonlocal version (13) of the SIR model is an advancement model to investigate the propagation of the epidemic [48]. Researchers have been studying diffusion and nonlocal dispersal with delayed transmission in the SIR model [294, 295, 296, 297]. In [48], Kendall proved the existence of a travelling wave solution of this nonlocal model with a minimum speed. Another type of nonlocal epidemic model has been studied in recent days [49, 298, 299], namely age-structured susceptible-infectious-susceptible (SIS). This is mainly a nonlocal spatial diffusion model, slightly different from earlier considerations. Suppose, at time and at , and are the densities of susceptible and infective individuals of age . We further assume that is the maximum of the individuals and is finite. Now, for , , and , we consider an age-structured nonlocal model as [299]:
(40) | ||||
where the terms and are the nonlocal dispersal terms as defined in (8). The term is the force of infection of infectious individuals to susceptible individuals of age , is the mortality rate of the individuals, and is the recovery rate. The force of infection is given by
where represents the rate of disease transmission from infective individuals of age at position to susceptible individuals of age “” at position . If the dispersal of individuals follows a random walk, then the age-structured SIS model (40) reduces to the local model
(41) | ||||
These models consider nonlocal interactions between individuals, accounting for long-range disease transmission and spatial interactions that traditional local epidemiological models do not capture. These are essential in scenarios where geographic distances influence the spread of infections. Researchers have been studying the nonlocal dispersal epidemic models with and without age structures [49, 298, 299, 300, 301, 302]. Most of these studies have been focused on the existence of travelling wave solutions to capture the transmission of the disease. In addition, researchers have studied the memory effect on disease propagation with the help of FODE to reveal the inherent memory of the disease propagation based on the size of the initial infected population [23].
Different types of models can be employed to study the spread of infectious diseases, and they may include elements such as population dynamics, epidemiological parameters, and the effects of interventions like vaccination. As discussed in the previous section, the transmission of the COVID-19 virus is nonlocal because people travelling between different areas have the potential to bring the virus to new places or contribute to its spread within and between groups. One of the most important strategies for halting the COVID-19 outbreak has been vaccination [123]. Effective vaccinations limit the overall spread of the virus among the community by reducing the severity of the illness and promoting herd immunity. These transmissions can be simulated and predicted using mathematical models, which often incorporate differential equations. These models can account for variables, including travel patterns, vaccination coverage, recovery rates, and infection rates. Researchers use computational models to investigate various scenarios and provide guidance for public health policies. For instance, compartmental models (e.g., nonlocal SIR models discussed earlier), agent-based models, and spatial models are often used for this purpose. Policymakers can use these models to inform choices on vaccination distribution, travel bans, and other ways to stop the virus from spreading.
3.2 Biology, medicine and health sciences
Nonlocal interactions in cell biology are an exciting field of study because they provide a deeper understanding of cell behaviours and tissue dynamics in a variety of healthy and pathological circumstances. It gives more insight into the cooperation and exchange of information among cells in complex biological systems as cellular imaging and computational tools advance. Nonlocal interaction refers to the long-range signalling and communication between cells that extend beyond their immediate neighbours, and it captures various biological phenomena in cell biology, such as tissue morphogenesis [44] and wound healing [303]. In addition, cancer cells interact with the extracellular matrix and surrounding tissues in tumour growth and invasion over extended distances [304]. Therefore, these models have been employed to describe tumor growth patterns and the influence of micro-environmental factors. Furthermore, nonlocal interaction plays a significant role in coordinating the movements of cells within the migrating group, enabling efficient collective migration.
The spatial spreading patterns of invasive cell populations have been modelled by the Fisher-KPP equation and its extensions and applied in vivo malignant spreading [305, 306, 307] and in vitro cell biology experiments [308, 309, 310, 311, 312]. The most common disease, ‘cancer’, is a collection of diseases described by uncontrolled growth of cells and tumor development that invades the tissue of origin and distant organs [90]. Researchers have suggested that intrinsic and environmental bottlenecks challenge early tumour growth and progression [313, 314, 315, 316, 317]. In the initial stage, a small subset of cancer cells called ‘cancer stem cells’ intrinsically populates the tumour. The agent-based nonlocal model (6) describes the time evolution of cancer stem cells and tumour cells [90]. This modelling approach widely applies to solid, avascular tumours in any organ.
The nonlocal model (9) can be applied to various aspects of cell migration and growth [44]. For example, this model could account for the tumour cell heterogeneity behaviour influenced by the tumour microenvironment’s composition. The memory effect is one of the key factors in disease propagation, and in this case, time-fractional RD equations (e.g., the nonlocal model (10)) are used in the mathematical model to incorporate such an evolution process.
In addition, anomalous diffusion processes, characterized by fractional diffusion equations, have been observed in biological transport systems, such as the movement of molecules within cells or through porous media. These models also have been applied to study the movement of molecules, proteins, and lipids in biological membranes. The anomalous transport accounts for the nonlocal interactions and memory effects of diffusing species within the membrane, e.g., tumor growth and invasion [318]. These models further capture the anomalous transport of cancer cells and the interactions between tumor cells and their microenvironment, providing insights into tumor growth patterns and invasion dynamics. In addition, these models account for the nonlocal and memory effects of drug diffusion within the polymer, providing a more accurate representation of drug release kinetics [319]. Furthermore, the nonlocal models with fractional derivatives have been applied to describe anomalous transport of molecules in biological tissues, such as fractional Fick’s law for describing fractional diffusion of solutes in biological membranes.
Fractional models are used to describe the movement of neurotransmitters and other molecules within neurons, accounting for the nonlocal interactions and subdiffusive behaviour observed in neuronal dynamics [320]. Furthermore, these models are used to describe the memory effects and long-range interactions in immune cell recruitment and activation during an immune response.
Biology conservation laws represent fundamental mass or energy conservation principles in biological systems. They ensure that the total amount of mass or energy within a specific domain remains constant over time, which is essential for the accurate modelling of biological processes. For instance, conservation laws in biology include mass conservation in biological transport [321], conservation of energy in metabolic processes [322, 323], and conservation of species or population densities in ecological systems [324].
Nonlocal problems and conservation laws have been increasingly applied in mathematical modelling in biology. They are studied in various biological systems where the interactions between components are not limited to immediate neighbours and where the conservation of certain quantities is crucial to understanding the system’s dynamics. Suppose in the absence of diffusion, a population density moves with the velocity , where and . Here as it represents the density. In our timescale of interest, if we neglect birth, death, immigration, and emigration of organisms, then satisfies the standard conservation equation
(42) |
Following the basic principles of aggregation and dispersal, we can divide the velocity into two groups: individuals move towards and away from each other [242, 325, 326, 327]. Suppose and are the attractive and dispersive velocities of the populations at time , and hence the resultant velocity . The species’ aggregation may occur due to some sensing mechanism (e.g., smell or sight), and we can assume a spatial average of nearby populations with some weights for this sensing, i.e., nonlocal sensing. Taking all these into consideration, the attractive nonlocal velocity as [249]:
where
is the species-specific attractive speed, is the characteristic range of the nonlocal sensing, and is the characteristic density. On the other hand, dispersal arises from the anti-crowding mechanism, which operates over a shorter scale [242, 328], and we can consider this as spatially local. The direction of dispersal is generally opposite to the direction of population gradients, and the simplest model in describing these effects as
where is the ratio of repulsive to aggregative velocities. Taking all these factors into the equation (42), we obtain
Following [249], after rescaling this model, we obtain:
(43) |
This dimensionless model (43) conserves the zeroth and first moments of but does not conserve higher moments [249]. The zeroth moment shows that the total mass is conserved, while the first moment implies that the centre of mass is conserved.
Now, we consider a nonlocal chemotaxis model for cell migration, which follows the mass conservation law. Suppose is the density distribution of a cell population at a mesoscopic level at time and position [329]. Here is the statistical distribution of the speed with the maximal speed , and is the polarization directions. Then, the transport equation for the cell distribution at the mesoscopic level is given by [329]:
(44) |
where is the scattering of the microscopic velocity in direction and speed. The run and tumble are the typical microscopic dynamics of a cell [330, 331]. These are modelled by the velocity jump process, characterized by a turning frequency and transition probability [329, 332]. Assuming the nonlocal transition probability [333] and its independency on the prep-orientation velocity [332, 334, 335], the turning operator becomes [329]:
with the normality condition on , i.e.,
In the two-dimensional bounded domain, authors in [329] studied the model (44) with mass conservation. By incorporating nonlocal interactions and conservation laws, mathematical models in biology can better capture the complexities of biological systems and provide deeper insights into the behaviour of living organisms. These modelling approaches are particularly relevant in studying systems with spatial dependencies, memory effects, and long-range interactions, which are prevalent in many biological processes.
Nonlocal interactions in cell biology refer to interactions between cellular components that extend beyond immediate neighbours and may involve long-range signalling or communication. These interactions play a crucial role in cellular processes and behaviours, such as cell migration, pattern formation, and collective cell responses. Cellular adhesion is one of the fundamental forms of cell-cell interactions, and its continuum modelling remains mathematically challenging [132]. The adhesion model (20) is the first continuum model, verified experimentally in Steinberg’s adhesion-driven cell-sorting experiments [133]. This model has been extended and applied to many areas, e.g., cell-cell and cell-extracellular matrix (ECM) adhesion in studying the invasion of cancer cells into the ECM [336, 134, 337, 338, 339, 340]. This type of nonlocal advection-reaction-diffusion model can capture the cell-cell interactions to account for chemotactic movements due to overcrowding or the action of the stellates’ processes on hepatocytes [133, 134, 341, 342]. The coexistence of chemotaxis occurs in vivo in disease propagation, e.g., wound healing or cancer progression [343, 329]. Fibroblasts migrate efficiently along collagen or fibronectin fibers in connective tissues during wound healing [344]. In the case of tumor spread, cancer cells follow the aligned fibers at the tumor-stroma interface. The nonlocal model (44) for cell distributions can capture cell migration at the mesoscopic level.
Different types of self-organization biological aggregations exist in nature, e.g., insect swarms, ungulate herds, fish schools, and bacterial colonies [345, 346]. These aggregations arise from different social phenomena without the influence of external stimuli such as attraction, group cohesion, repulsion, and collision avoidance [242]. Sometimes, biological aggregation forms distinct groups with a sharp edge, called clumping [347, 348]. This clumping behaviour can be observed analytically [43] and numerically [326] for two or higher-dimensional models but not for one-dimensional models built on realistic assumptions about social interactions on swarming behaviours. On the other hand, the clumping behaviour can arise in a simple nonlocal biological aggregation model (43) for one or higher-dimensional models. The model (43) preserves integro-differential conservation law with two movement terms: nonlinear degenerate diffusion arising from anti-crowding behaviour, and the other describes attractive nonlocal social interactions [249]. Further research into nonlocal interactions in cell biology will help to a greater understanding of cellular processes and their significance to development, illness, and tissue engineering as experimental tools and computational methodologies evolve.
Energy-harvesting electronics and gadgets have gained popularity in biomedical applications, having the potential to power medical equipment and sensors utilizing ambient energy sources. For example, electrical energy may be produced from mechanical vibrations or motions of bodily motion. In addition, the temperature gradients within the body or the surrounding environment can be used to generate electricity. Energy-harvesting technologies provide implanted medical devices with a long-term power source, such as triboelectric or piezoelectric generators, which can eliminate the need for battery replacement [234, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360]. Implantable devices driven by harvested energy provide precise and regulated medication delivery, increasing the efficacy of medicinal therapies [361]. The development of self-powered sensors is essential in remote patient monitoring systems and ensures continuous data collection without the need for frequent maintenance [362].
3.3 Physics, chemistry, and mechanics helping life science applications
The RD systems have also been applied to high energy physics (HEP) and statistical physics. RD models proposed by Balitsky and by Jalilian-Marian, Iancu, McLerran, Leonidov, Kovner, and Weigert (JIMLKW) have been used to understand the high energy hard scattering near or at the unitarity limit [363, 364]. Ikeda, Nagasawa, and Watanabe have introduced the branching Brownian motion in statistical physics [365, 366], which can be associated with the classical Fisher-KPP equation, as shown by McKean in [367]. Nonlocal interactions can occur as a result of long-range forces such as gravitational or electromagnetic interactions and can have a considerable impact on the behaviour and dynamics of multi-body systems. These interactions are critical in astrophysics for analyzing the dynamics of galaxies because gravitational forces between stars and other celestial entities reach over large distances [368]. In galaxies, nonlocal interactions between stars and dark matter particles regulate galactic systems’ overall structure, rotation, and stability. Furthermore, the authors of [369] examined the self-interacting dark matter in cosmology, emphasizing the importance of nonlocal interactions in the dynamics of multi-body systems on cosmological scales.
Nonlocal variational formulations have been used to derive and study nonlocal PDEs, which appear in diverse physical and biological systems. For example, the nonlocal aggregation equation (42) has been adapted to describe biological organisms [370, 371, 372], and it minimizes energy
(45) |
and it can be used to analyze the existence and stability of equilibrium points [373, 374, 375]. Despite its popularity, it is not biological for a minimizer of mass ; doubling the mass yields a double-density minimizer. On the other hand, the dimensionless aggregation model (43) does form well-spaced groups. This model minimizes the energy [249, 376, 377]:
(46) |
These nonlocal variational problems are also used in image denoising and restoration tasks. The nonlocal operators capture the similarities between different image patches and help preserve important structures while reducing noise [378]. Furthermore, these problems are employed to study material’s deformation and fracture behaviour with long-range interactions and discontinuities, such as brittle materials and nanomaterials.
Nonlocal models also describe Ohmic heat production in different industrial processes, e.g., food sterilization, thermistor devices [379], etc. Using Ohmic heating, the nonlocal model of food sterilization in the one-dimensional spatial domain is given as [380]:
with the initial condition and the boundary condition . Here, the function is the dimensionless electrical reactivity, and is the square of the applied potential difference.
Nonlocal models are used in many domains, including mechanics, materials science, and continuum physics. Nowadays, nanotechnology is one of the main technological interests in the research community, and nonlocal continuum mechanics could play a potential role in analyzing their applications [210]. Piezoelectric materials are used to make ultrasound scanners, and these sensors use the converse piezoelectric effect to send out sound vibrations reflected by muscles, organs, etc. [61]. These ultrasound devices also use the piezoelectric effect to detect the reflected sound. Then, they are displayed as images so that doctors can see those highly detailed 3D images for treatments. Other types of applications of these materials in the medical field are the making of sensors for electronic stethoscopes, hearing aids, flow meters to monitor vascular health and both external and internal sensors for health status monitoring. These materials are also used in the automobile industry, e.g., knock sensors, tire pressure monitors, airbag and seatbelt sensors, gyroscopes, accelerometers, and engine fluid detection [381]. Piezoelectric materials and devices are increasingly important in the digital and physical world.
Quantum dots are examples of a low-dimensional nanostructure, and researchers have been focused on these due to their several nanoelectronic applications [211, 382]. In the context of nano-inclusions and quantum dots, the size dependency of mechanical strain at the nanoscale has been brought to light in recent publications. Piezoelectricity is the growing importance of nonlocal models in the context of smart materials and structure [383]. Gradient theories are closer to microscopic theories like lattice dynamics than classical continuum theories. They are still applicable when the characteristic length of a problem is so small that classical continuum theories begin to fail [383]. The application of nonlocal continuum theory to nanotechnology was initially addressed by Peddieson et al. [210]. This model has been extended to the buckling and vibration analysis of multiwall carbon nanotubes [53].
Peridynamics is a nonlocal theory and is one of the key methods for modelling biological material fracture [227]. The main advantage of this nonlocal model is that it deals with continuous and discrete media [59]. It has been applied to find (i) the relationship between fracture and healing in cortical bone [57]; (ii) fracture in anisotropic cortical bone [225]; (iii) fracture in a complex wood microstructure [227]; (iv) rupture in a micron-scale biological membrane [58]; (v) fracture in a porous material [384]. Furthermore, peridynamics is used to model tissue growth and shrinkage. The distribution of division angle orientations influences tissue scale growth, and researchers have been trying to predict it in an individual cell [385]. Authors in [59] proposed a mechanics-based model with the help of the peridynamics framework. In addition, the authors have shown cell death differences on cellular and larger length scales. In particular, cell death may create gaps between cells in some cases, leading to tissue shrinkage in other cases.
The nonlocal effects in heat-mass transfer arise in a wide variety of modern practical applications in materials sciences, e.g., metallic nanowires [386], high-power laser melting [387], colloidal solidification [388], frontal polymerization [389], etc. The classical diffusion theory based on Fick’s law suggests the diffusion flux at a spatial point , and a time moment depends on the concentration gradient at the same space-time point. These classical heat conduction laws apply at macro-temporal and spatial scales but not to thermal non-equilibrium situations, e.g., cryogenic engineering, laser-aided material processing, high-rate heat transfer in rarefied media, etc. Nowadays, researchers believe that heat-mass transport is an inherently nonlocal phenomenon. For instance, in one spatial dimension, a particle can come to a spatial point at a time moment from a spatial point or where it was at a time moment . It implies a time lag between the diffusion flux and the particle concentration. This time lag is called relaxation time, particularly the mean collision time for gas particles. In the one-dimensional case, the net flux at a spatial point and time is given by
where is the particle concentration, and is the particle mean velocity. Now, expanding both sides as Taylor’s series expansion for the small parameters and , we obtain
(47) |
After applying the zero-order approximation and Fick’s law, one can obtain the classical diffusion equation of the parabolic type. In addition, this approximation is valid for slow processes, i.e., and , where and are the characteristic time and distances, respectively. For the other cases, e.g., and/or , higher order approximation should be used as the nonlocal effects play a significant role. If the diffusion-like condition connects the small parameters:
(48) |
then, the first order approximation of (47) along with the mass conservation law, one can obtain [390, 391, 392]:
This is a parabolic type nonlocal equation, and for the same limiting condition (48), a higher order approximation also gives the parabolic type equation. For the wavelike dynamics, the limiting relation between the small parameters and is
(49) |
The first-order approximation of (47) along with the condition (49) and the mass conservation law, one can find a hyperbolic type nonlocal equation:
The limiting condition (49) also reduces to the hyperbolic type nonlocal equation for higher order approximation of (47).
4 Emerging Trends, Future Directions, and Outlook
The areas of mathematical modelling in biology are still evolving; various developing patterns in nonlocal mathematical models have been observed. As research progresses, these models are expected to play an increasingly significant role in addressing new challenges in the field of biology and life sciences. These trends reflect advances in computational approaches, enhanced experimental data availability, and a rising acknowledgement of the importance of nonlocal interactions in understanding complex biological phenomena. Some of the emerging trends in nonlocal mathematical models are the following.
Multi-scale modelling: Biological systems often span multiple spatial and temporal scales, and nonlocal models provide a robust and powerful framework to bridge these scales and capture the intricate interactions between different components of the system, from molecular to cellular to tissue and organism levels, however, traditional modelling approaches often focus only on specific scales [55, 56].
Human-environment systems, biodiversity, and ecological modelling: Human-environment systems represent the intricate relationship between human societies and their surrounding environments [393]. In addition, biodiversity is the variety of life on Earth, encompassing different species, ecosystems, and genetic diversity. It is critical for maintaining ecological balance, delivering ecosystem services, and contributing to ecosystem resilience in the face of environmental change. Ecological modelling is developing and analyzing mathematical and computer models to replicate and comprehend the dynamics of ecosystems. Studying the spatio-temporal trends of human activities, such as deforestation rates, carbon emissions, and resource consumption, provides insights into the evolving nature of anthropogenic impacts on the environment. These models assist researchers in predicting the impact of human activities on biodiversity, studying ecosystem responses, and developing sustainable resource management techniques.
Collective cell migration: Collective cell migration is a phenomenon where groups of cells move together to achieve specific functions, such as embryonic development, wound healing, or cancer invasion [65, 66, 44]. These nonlocal interactions can influence cell behaviour, signalling, and collective dynamics in complex biological systems. These interactions play a significant role in coordinating the movements of cells within the migrating group, enabling efficient collective migration [394].
Proteomics, nucleic acids, and polymer modelling: Proteins are composed of amino acid chains and are vital for numerous biological functions. Their stability is influenced by factors such as temperature, pH, and interactions with other molecules. Cooperative self-assembly is a ubiquitous phenomenon found in natural systems [395]. However, these proteins lose their native structure through a process called “denaturation” due to environmental changes, which cause either reversible or irreversible changes in function. On the other hand, nucleic acids (DNA and RNA) are responsible for storing and transmitting genetic information. Biological polymers are large molecules composed of repeating structural units, and they are versatile, exhibit unique properties, and have various applications. Polymers for gene delivery systems occur across various length scales, from the molecular level to macroscopic structures, and aim to safely and effectively transport genetic material, such as DNA or RNA, into target cells [396, 397, 398, 399, 400, 401]. Polymeric fluids refer to liquids containing long-chain polymers and can exhibit complex rheological behaviour due to the interplay of molecular weight, concentration, and temperature [402, 403, 404, 405, 406]. Furthermore, DNA damage within a biological network, such as a cellular or genomic network, can have profound implications for cellular function, integrity, and overall health.
Dissipative processes in biosystems and structures: Dissipation is the conversion of energy from one form to another, which frequently results in the preservation of organized structures and the survival of life [407]. Living organisms are open systems that interchange matter and energy with their environment, allowing organized structures and functions to form. In addition, the non-equilibrium thermodynamic concepts regulate the dissipative processes in biosystems [408]. The constant flow of energy maintains life by facilitating biochemical processes and sustaining dynamic equilibrium, such as the Belousov-Zhabotinsky reaction [409], from cellular metabolism to organismal homeostasis. These oscillations are examples of out-of-equilibrium dynamics that highlight biosystems’ ability to maintain order through energy dissipation.
Synthetic biology and nonlocal model development: Synthetic biology is a multidisciplinary discipline that combines biological, engineering, and computer science ideas to produce synthetic creatures, genetic circuits, and biomolecular systems. Nonlocal models give a more complete picture of how biological components interact across distances inside a cell or a population of cells. This is especially important when creating synthetic biological systems with complex spatial and temporal relationships. These models are used in the construction of gene regulatory networks, allowing long-range interactions to be considered, which improves the accuracy of synthetic biology techniques for regulating gene expression [410]. Furthermore, similar principles are extended to the study of population dynamics to include interactions between cells or animals that occur at a distance, which aids in the design of synthetic ecosystems and the understanding of emergent behaviours [411]. Nevertheless, wine fermentation involves the complex biochemical and physical processes transforming grapes into wine. The process is often characterized by the activities of numerous microorganisms, the consumption of sugars, and the creation of alcohol, carbon dioxide, and other byproducts. The dynamics of fermentation can be better understood using numerical modelling, particularly when it is based on integro-differential equations [412]. As research in both domains advances, the incorporation of nonlocal models into synthetic biology adds to the development of novel biological tools, systems, and creatures with better spatial and temporal functions.
Nonlocal models in systems biology: Systems biology seeks to understand the complex processes that occur inside biological systems by combining experimental data, computational modelling, and mathematical investigations. Nonlocal models are very useful in systems biology when dealing with distributed networks, such as signalling pathways, in which molecules can impact each other across distances inside a cell or tissue. It is also important to find the parameter values associated with the nonlocal model, which is called the inverse problem in systems biology [413]. As collecting data and mathematical models advance, resolving challenges associated with inverse problems will lead to more precise and customized techniques in medicine, genetics, drug development, and other life science areas.
Peridynamics: The application of peridynamics in biology is still an emerging area, and its adoption and development will rely on further advancements in computational techniques, experimental validation, and interdisciplinary collaborations between researchers in engineering, materials science, and biology [58, 414]. As the field progresses, peridynamics holds the potential to offer valuable insights into the mechanics and behaviour of biological systems under various conditions [59].
Biomimetics, bionics, and bio-inspired information processing: Genetic circuits and neuromorphic computation work in distinct biological environments, but their analogies emphasize the information processing, adaptability, and resilience principles that are critical to the operation of both systems. In addition, intercellular coupling is essential for multicellular organisms to function properly and maintain homeostasis. Disruptions in these communication pathways can lead to a variety of illnesses and developmental problems. The most significant type of natural computers may be found in biological systems that do computing on numerous levels [415]. Understanding these concepts can lead to breakthroughs in synthetic biology, biotechnology, and the creation of neuromorphic technological devices [416, 417]. Integration of signal and image processing with biology not only aids in the analysis of biological data but also in the development of computational models, diagnostic tools, and treatment methods. As bionic models evolve, driven by advances in materials, sensors, and robotics, the quality of life for people with disabilities will improve, human capacities will be enhanced, and numerous health concerns will be addressed [418, 419, 420].
Coupled effects and phenomena, anisotropy, and auxeticity in biosystems: Many biological tissues display features that are dependent on direction, making the appropriate representation of anisotropy in biological tissues essential to understanding their mechanical behaviour. For instance, the human cornea involves capturing its complex structure and mechanical behaviour for various applications, such as understanding biomechanics, predicting responses to surgical procedures, and designing contact lenses. In addition, the modelling of scleral collagen requires the overall tissue architecture, anisotropy, and interactions with other ocular structures. The incorporation of experimental data and imaging investigations into computational nonlocal models can improve their accuracy and applicability [421]. Flexoelectricity, piezoelectricity, and auxeticity are coupled effects that can have a major impact on the mechanical and electrical behaviour of materials, particularly in the setting of biosystems [422]. Furthermore, the study of piezoelectricity and other coupled effects in biological tissues has gained significant attention due to their potential applications in various biomedical fields [423, 424, 425, 426, 427, 428]. For instance, smart materials can exhibit both ferroelectric and piezoelectric properties (ferroelectric ceramics). Additionally, multiferroic materials show the coexistence of ferroelectricity and ferromagnetism, and they have been used for different bio applications [429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 294]. Shape memory alloys (SMAs) have distinct thermomechanical behaviour, and their hysteresis loops are impacted by the intricate interaction of mechanical and thermal factors. These SMAs have a wide range of biological applications, including thermoelasticity of red blood cell membranes and other biostructures [451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 426]. Nonlocal operations allow each pixel or area in an image to evaluate information from all other places, allowing the model to grasp the broader context [468]. This is useful for spotting small structures, deformities, or subtle patterns in biological pictures. These models also help in understanding cellular processes, interactions, and behaviours at the nanoscale [469]. Fractional calculus presents the notion of fractional order derivatives, which enables the modelling of processes with memory effects, long-range interactions, and nonlocal behaviour. This allows us to have a more accurate representation of biological and nanoscale processes with complex and nonlocal dynamics [470].
Nonlocal models for advancing the frontiers of medicine, nanoscience and nanotechnology: Nonlocal models provide a more accurate and comprehensive understanding of the behaviour of materials at the nanoscale. Nanocomposites are composed materials, a combination of nanoparticles and matrix material, which enhances their functionalities and opens up new possibilities in fields such as medicine, diagnostics, and biotechnology [471]. Self-assembled bio-nanostructures, like RNA-nanostructures, have a large number of applications across various fields [472, 473, 474, 475, 476]. These can be designed to encapsulate and deliver therapeutic agents like drugs or gene therapies to specific target cells or even in the development of RNA-based vaccines [397, 396, 398, 399, 400, 401, 477, 478, 479, 480, 481, 482]. Different biotechnologies based on RNA and DNA collectively contribute to advancements in medicine, basic research, and various industries [91, 483]. The nano-template viruses can be modified to carry therapeutic agents to specific cells or tissues, enhancing drug delivery precision and reducing off-target effects. In addition, carbon-based nanomaterials exhibit remarkable properties and have been used in emerging technology with potential applications in medical imaging and other fields [484, 485, 486, 487, 488, 489]. Biosensors detect specific analytes and convert this information into a measurable signal [490]. Nevertheless, environmentally-friendly technologies (e.g., biomedical and chemical sensors) for life sciences play crucial roles in various applications, providing valuable information for monitoring, diagnosis, and research [490, 491]. As materials are scaled down to the nanoscale, size-dependent effects and phenomena become more evident, e.g., flexoelectric effects are becoming more pronounced at the nanoscale. For instance, the nanoscale structures have many applications in biomedical and bioengineering, such as nanowires, nanorods, and nanowire superlattices [492, 493, 494, 495, 492, 496, 497, 498, 499, 500, 501] and quantum dots [430, 502, 503, 504, 505, 506, 507]. Furthermore, it is important to include the strain and the coupled effects together [508, 509, 510, 511]. The utilization of 2D materials such as graphene with pronounced coupled effects in biomedical engineering, e.g., graphene nanoribbons [507, 512, 513, 514, 515, 516], and other graphene-based nanostructures [517, 512, 518, 513, 519, 520].
Nonlocal neural models: Neurons in the brain communicate and interact with each other through synapses, which can involve long-range connections [521, 522, 523]. Nonlocal neural models have been employed to describe neurons’ collective activity and synchronization in neural networks. These models are gaining attention to represent neural networks’ long-range interactions and memory effects [524]. They can provide insights into brain function, learning, and cognition, e.g., how the information is processed and transmitted between neurons in neural networks, and they can benefit from considering nonlocal interactions.
Fractional model: Ecological systems often span multiple scales, from individual organisms to entire ecosystems. Fractional reaction-diffusion models can account for nonlocal interactions and dispersal across different spatial scales, making them valuable tools for studying population dynamics and species interactions in diverse ecological settings [525]. In addition, the study of anomalous diffusion, which departs from classical diffusion behaviour, is becoming more prevalent in nonlocal models. Fractional diffusion and subdiffusion models are being used to describe transport processes in complex biological media with irregular geometries or barriers [526]. For instance, the drug delivery within the tumor often exhibits anomalous transport behaviour.
Nonlocal models in ecology: Ecological systems are defined by complex interactions between species at various spatial scales [527, 528]. Nonlocal models are used to investigate species dispersal, habitat connectivity, and the effect of environmental changes on population dynamics. Furthermore, depending on the nature of the interactions, several types of nonlocal interaction are considered in the reaction terms, as well as self- or cross-diffusion [4, 62, 74]. Nonlocal dispersal is an essential aspect of ecological processes, and understanding its implications is vital for predicting species distributions, ecosystem dynamics, and responses to environmental changes [46]. As ecological research advances, the study of nonlocal dispersal in biological systems will likely remain a critical investigation area.
Treating diseases with innovative procedures: It involves exploring cutting-edge techniques, technologies, and approaches to improve patient outcomes. Some examples of innovative procedures in disease treatment include cryosurgery - cell destruction, thermal ablation, and laser ablation [97, 529, 530, 531]. Phase-lag models are mathematical frameworks used to describe the heat transfer processes in biological tissues. These models are useful for understanding thermal processes in live beings and are widely used in thermal therapy, hyperthermia therapies, and thermal imaging [532, 533, 534, 535]. Cardiac ablation, in particular, is a medical technique used to treat irregular heart rhythms by selectively eliminating or isolating portions of the heart tissue that create or conduct irregular electrical impulses [536, 537, 538, 539].
Brain dynamics and modelling in neuroscience: It is an interdisciplinary proposal to discover how the brain creates cognition and behaviour. Neuroimaging methods, such as fMRI and EEG, offer data for the development of data-driven models capable of capturing the spatiotemporal dynamics of brain activity and connection. These models are critical for creating brain-machine interfaces, which transform cerebral activity into commands for external devices, allowing persons with motor disabilities to communicate and operate technology [540]. Nonlocal models provide a framework for representing the long-distance connections that contribute to information integration and processing, as neural interactions frequently extend beyond immediate neighbours. Furthermore, brain dynamic models aid in the understanding of aberrant brain dynamics associated with illnesses such as Alzheimer’s disease and Parkinson’s disease [106, 541, 542].
Nonlocal models on network: Nonlocal interactions on networks have broader applications in systems biology, including protein-protein interaction networks, cell signalling networks, and ecological food webs [147, 543, 544]. Understanding and incorporating nonlocal interactions on networks are essential for capturing biological systems’ emergent properties and collective behaviours. As research in network biology progresses, the significance of nonlocal interactions in shaping the dynamics and functions of biological networks will continue to be a topic of interest and investigation.
Nonlocal models in personalized medicine: Nonlocal models are being investigated in medicine to explain better individual variability and tailored responses to treatments [545]. Individual-specific dynamics in diseases are being characterized using fractional calculus, and individualized therapeutic actions are being predicted.
Nonlocal models in epidemiology: Nonlocal epidemiological models are valuable in understanding disease dynamics in real-world scenarios, where the assumption of local interactions is often inadequate [119]. They have applications in public health planning, disease control strategies, and outbreak predictions. As our understanding of infectious diseases and computational methods continue to advance, nonlocal epidemiological models will play an increasingly crucial role in addressing emerging challenges in biology and epidemiology.
Nonlocal interactions in social networks and biosocial dynamics: Complex networks provide a powerful lens for understanding the structure and behaviour of interconnected systems in diverse domains [546, 395]. For instance, social networks exhibit nonlocal interactions which extend connections among individuals. The structure of social networks is characterized by ties that go beyond direct acquaintances and influence the spread of information, behaviours, and opinions [190, 547, 548, 549]. On the other hand, biosocial dynamics incorporate the spread of health behaviours, such as smoking cessation, exercise adoption, and vaccination uptake [550]. The connectivity patterns within populations influence the dynamics of disease transmission, and network models assist in designing effective control strategies [551, 552, 153, 553]. Human connectomes are highly connected hubs involving complex interactions between regions and their relevance for different processes [554, 555]. Furthermore, nonlocal interactions contribute to the transmission of emotional experiences, influencing mental health and well-being [556].
Conservation laws in biological transport: The principles of conservation laws, such as mass or energy conservation, are fundamental in understanding various biological transport processes [321]. For instance, they are applied in modelling blood flow in vessels, nutrient transport in plants, and fluid dynamics in biological systems [557, 558]. By employing nonlocal problems and conservation laws in mathematical modelling, researchers can better understand complex biological phenomena and develop more accurate and realistic representations of biological processes involving long-range interactions and mass conservation.
Nonlocal variational problems: Nonlocal functionals arise in different contexts, such as fractional calculus, peridynamics, and nonlocal diffusion. The mathematical formulations of variational principles for nonlocal problems are a rapidly growing area in the interdisciplinary field.
Nonlocal models in integrating multiscale modelling and AI techniques: Nonlocal models play a crucial role in integrating multiscale modelling and AI techniques, providing a framework that captures interactions and influences beyond immediate neighbours or specific scales. For instance, AI techniques in neural networks can learn and represent long-range interactions, which allows for more accurate predictions and simulations across different scales. In addition, AI techniques can assist in optimizing parameters across different scales based on nonlocal information, improving the overall fidelity of the multiscale model. There are mathematical and computational challenges in the modelling of complex systems that involve multiphysics and multiscale processes [447]. But, overall, nonlocal models serve as a bridge in integrating multiscale modelling and AI techniques by providing a comprehensive framework for capturing new insights into disease mechanisms on different scales, which helps in identifying new targets and treatment strategies for the benefit of human health [559].
Active matter and nonlocal models: Active matter refers to a class of materials or systems that can convert energy into mechanical work to generate self-driven motion. These systems are distinguished by their individual components’ capacity to drive themselves actively, showing aggregate behaviours that result from interactions between these active entities. Active matter is a large and multidisciplinary area that includes biological creatures, synthetic microswimmers, and even certain types of materials [560, 561]. Nonlocality is essential for capturing the long-range correlations and collective behaviours that appear often in active matter systems. For example, the Vicsek model depicts the collective motion of self-propelled particles aligning with their neighbours [562]. It considers the average alignment of particles in a certain neighbourhood to add nonlocal interactions. Several theoretical frameworks and mathematical models, generally taken from statistical mechanics, fluid dynamics, and soft matter physics, have been constructed to characterize active matter and integrate nonlocal interactions. This method is critical for researching phenomena like flocking, swarming, and pattern development.
Nonlocal models in bio-inspired technologies: Nonlocal models help in capturing the nonlocal interactions and behaviours observed in biological systems, which allows for the development of more efficient, adaptive, and biomimetic technologies. These models are employed in simulating the adaptive properties of biological materials and structures, e.g., self-healing, self-repair, and responsiveness to environmental changes. Furthermore, these models allow for the simulation of how bio-inspired technology often involves the development of sensors for enhancing sensory systems in areas including environmental monitoring and surveillance. These emerging developments emphasize the growing importance of nonlocal mathematical models in solving complicated biological challenges and exploring new mathematical biology frontiers. In addition, electron transfer processes are vital in many chemical reactions and biological systems. Nonlocal models, such as the Marcus theory, consider the nonlocal electron transfer interactions between donor and acceptor molecules. These models account for the influence of solvent polarization and nuclear motions on electron transfer rates, leading to a more accurate description of electron transfer phenomena. Nonlocal models are likely to play a critical role in enhancing our understanding of varied biological systems as interdisciplinary research expands.
Complex adaptive systems: There is a growing interest in complex adaptive systems, and a new framework is being created to combine classical and quantum systems using “emergent” quantum theory in complex adaptive systems [563, 564]. Some hidden variables in classical nonlocal models impact the outcomes of measurements and can reveal correlations that local, realistic theories cannot explain. Quantum mechanics, on the other hand, introduces nonlocality through phenomena such as entanglement, in which particles become correlated. Nonlocality is a fundamental property of quantum physics, although it may also be investigated in some classical systems. Interestingly, the complex adaptive system is directly relevant to Lotka-Volterra systems, and researchers argue that the emergent quantum theory of Lotka-Volterra dynamics is described by the emergent stationary Schrodinger equation.
Coarse-grained models and computations with equation-free models: Coarse-grained models are simplified representations of complicated systems that average or combine small components to capture the essential aspects. These models involve constructing a hierarchy of models that explain the system at various degrees of detail. On the other hand, equation-free models are computational tools that allow for the study and simulation of complex systems without explicit knowledge of governing equations. These strategies are especially effective when the system dynamics are unclear or computationally costly. Equation-free models are used in a wide range of disciplines, including neurology, climate science, and materials research. Coarse-grained models and equation-free models are both effective tools for modelling and evaluating complex systems in situations when standard methodologies are unfeasible, according to [565]. They enable researchers to get insights into the emergent behaviour and dynamics of multiscale systems without having to study the microscopic processes in depth.
Hyperbolic and thermal relaxation models, other sources of nonlocality: Hyperbolic thermoelasticity is the coupled of heat conduction and elastic wave equations and describes the evolution of temperature and displacement fields in the material. It has many applications in various fields, including biology, the design of thermal devices, and the understanding of heat transfer mechanisms at the microscopic level [566, 567, 568, 569, 503]. In addition, the heat conduction equation with appropriate relaxation terms captures the time-dependent behaviour of the material during thermal ablation [570], which is typically used to destroy or damage tissues for the treatment of tumors. Furthermore, nonlocal PDEs play a significant role in modelling various phenomena, e.g., swarming behaviour, nonlinear diffusion, models in fluid dynamics and fluid-structure interaction for biological and life science problems [571, 231]. Nonlinear nonlocal models also account for competing effects (e.g., attractive and repulsive forces). Biological tissues, such as tendons, ligaments, and bone, have intricate microstructures that can lead to non-uniform stress and strain distributions. Nonlocal plasticity models are motivated by the need to capture size effects, strain localization, and the influence of remote material points on deformation patterns in these tissues, enhancing our understanding of tissue mechanics and guiding advancements in bioengineering [572, 573, 574]. In addition, phase-field models in materials are used to study the evolution of phase boundaries, such as solidification, melting, and phase separation [575, 576, 577, 578, 579, 580]. The nonlocal effects in the phase-field models are especially relevant in materials where the interface width is not negligible compared to the system size. Contact mechanics also considers the nonlocal model, which deals with the deformation and interaction of solid surfaces in contact. Nevertheless, the spatial organization and arrangement of certain features or structures happens within a semiconductor material [581]. This phenomenon is significant in semiconductor technology as it directly affects the operation and performance of electronic devices, including those critical in healthcare bioengineering and biomedicine.
4.1 Future directions
Nonlocal models have shown promise in comprehending phenomena in biological systems such as collective behaviour, pattern formation, and information transfer. To acquire insights into emergent behaviours, future studies could look into how to integrate nonlocal interactions into more complex biological systems, such as multi-cellular organisms or ecosystems. These developments will further enhance our understanding of complex biological phenomena and pave the way for new applications and discoveries. Some future directions of nonlocal mathematical models are as follows.
Coupling of multiple scales and multi-body systems: Integrating multiple scales into nonlocal models allows researchers to bridge the gap between molecular-level interactions and tissue or organ-level behaviours. Future studies may focus on refining methods to couple various scales effectively, enabling more accurate predictions of biological processes at different hierarchical levels [582]. In the context of multi-scale porous media, such as biological tissues or cellular membranes, fractional diffusion models are used to describe how substances diffuse within the intricate network of interconnected pores. Traditional diffusion models are inadequate for accurately representing such complex structures, but fractional diffusion equations can effectively capture the anomalous transport observed in multiscale porous media [583, 584]. Furthermore, nonlocal interactions in multi-body systems are a fascinating research area, and their study has applications in diverse fields, including physics, materials science, and geophysics [56]. As experimental techniques and computational methods continue to advance, our understanding of the role of nonlocal interactions in multi-body systems is expected to deepen, leading to new discoveries and applications in various disciplines.
Cell migration: Nonlocal interactions in cell biology are a fascinating area of research, and they are essential in understanding how cells coordinate their activities in complex biological processes. Nonlocal models can be used to study the spatial and temporal aspects of immune responses, such as immune cell migration, pathogen spreading, and tissue repair. As experimental techniques and computational methods advance, the study of nonlocal interactions in cell biology will continue to provide valuable insights into the emergent behaviours and collective dynamics of cells in tissues and organisms [585]. In addition, nonlocal models using fractional calculus could be used to capture the long-range communication and coordination among migrating cells, shedding light on the mechanisms governing collective cell behaviours.
Hybrid models: Hybrid models can combine partial differential equations (PDEs) that describe spatial processes with ordinary differential equations (ODEs) that represent temporal dynamics. In this type of hybrid model, the local interactions represent the immediate influence of neighbouring elements, while nonlocal interactions account for long-range dependencies. These models could be used to study systems with spatial heterogeneity and temporal dynamics, such as cancer growth, morphogenesis, pattern formation, metastasis, competition, and predation in predator-prey interactions [46, 62, 304]. These models could be used further to model the spreading of signals, morphogens, or chemicals over extended distances in finding spatial patterns.
Peridynamics: Peridynamics is a mathematical framework that extends classical continuum mechanics to describe the behaviour of materials with discontinuities and fractures. While peridynamics has been widely used in engineering and materials science, its applications in biology are still relatively new and evolving. It can be applied to model the mechanics of biological tissues, such as soft tissues (e.g., muscle, cartilage), hard tissues (e.g., bone), and invasion of cancer cells into surrounding tissues [59]. Furthermore, it can be employed to study the mechanics of biological membranes (e.g., lipid bilayers), cell migration, and the interactions between migrating cells and their surroundings.
Epidemiological models: Nonlocal epidemiological models continue to be an important research area, especially in the context of emerging infectious diseases and the influence of spatial factors on disease transmission dynamics [119, 586]. Different types of physiological age structure characteristics of the population can be considered in the model to improve the predictions for infectious disease transmissions. As research in this field progresses, nonlocal models are expected to be increasingly important to guide public health interventions and inform disease control strategies in understanding infectious diseases, and computational capabilities also have to improve in parallel.
Neural networks: In computational neuroscience, hybrid neural network models combine local, point-to-point synaptic connections with nonlocal, spatially extended interactions. This allows for the integration of both short-range and long-range interactions observed in real neural networks [587]. These models are employed to study brain function, learning, and memory processes. In addition, neurons in the brain have a multi-compartmental structure with dendrites, soma, and axons. Fractional-order differential equations can be used to model the electrical activity within neurons, accounting for the nonlocal interactions between different compartments [320, 588]. These models are essential for understanding how information is integrated and processed in complex neural networks.
Fractional derivative models: Extending nonlocal models to the time domain using fractional calculus will enable modelling memory effects and history-dependent processes in biological systems. In the context of emerging infectious diseases, traditional local epidemiological models may fail to account for the impact of long-range dispersal and spatial heterogeneity. However, fractional epidemic models with nonlocal interactions can be used to study the spread of diseases in heterogeneous environments [120]. In addition, the folding and aggregation of proteins are complex processes influenced by long-range interactions between amino acids [589]. In this case, the fractional models can be applied to study protein folding kinetics and aggregation dynamics to understand the underlying mechanisms of protein misfolding diseases, such as Alzheimer’s and Parkinson’s.
Variational problems: There are many challenges and unique features associated with variational problems in understanding complex systems in biology, materials science, and social dynamics [590, 591]. For instance, the analytical and numerical methods employed to tackle nonlocal variational problems, including the use of nonlocal differential operators and integral equations.
Stochastic nonlocal models: Future nonlocal models may incorporate stochasticity to account for inherent randomness and uncertainty in biological systems. Stochastic nonlocal models will allow for a more realistic representation of noise-driven processes and enable the exploration of system robustness and variability.
Biosocial dynamics: The collective behaviour of animal groups, such as flocking birds or schooling fish, relies on nonlocal interactions that enable coordinated movements over large distances [592]. Nonlocal models have been used to investigate these animal groups’ emergent patterns and self-organization, offering insights into their decision-making processes and survival strategies. Nevertheless, nonlocal models can offer a powerful framework for studying human social dynamics, allowing researchers to capture the complexity of interactions that extend beyond local connections, e.g., information spread, the epidemiological spread of behaviours, migration, long-term social evolution, etc.
Data-driven approaches: As biological systems are often complex and high-dimensional, future research might explore the development of efficient numerical methods and simulations tailored to handle nonlocal interactions. This includes optimization techniques for parameter estimation and sensitivity analysis to gain deeper insights into model behaviour. The integration of machine learning and artificial intelligence techniques with nonlocal models could enhance the predictive capabilities and understanding of complex biological phenomena. Future research may explore how artificial intelligence can assist in pattern recognition, model calibration, and model selection for nonlocal models. Developing efficient and scalable numerical methods for nonlocal models will be crucial to handling the computational demands of large-scale biological systems and high-dimensional data.
Brain: The brain is a highly complex organ with complicated networks and connections, and nonlocal effects can play a crucial role in understanding various aspects of brain function [523]. Neuronal networks often exhibit long-range connections, where the activity in one region can influence distant regions. Modelling with these nonlocal models helps to understand how information is processed and integrated across different brain regions. In addition, nonlocal diffusion processes can be used to model the spread of molecules, neurotransmitters, or electrical signals across the brain tissue.
Genetics: Nonlocal problems in genetics refer to scenarios where genetic influences extend beyond the immediate vicinity, challenging the traditional assumptions of local interactions. Studying these problems helps to understand how genetic information spreads over space and time, which is crucial for deciphering the dynamics of evolution. It has different challenges, e.g., developing appropriate mathematical models, computational methods, and experimental techniques to observe and validate nonlocal genetic interactions.
4.2 Outlook
There are many advantages to considering the nonlocal models, such as capturing better spatially extended interactions, more accurate representation of long-range dependencies and enhanced predictive capabilities. Advances in experimental techniques and data collection have opened up new opportunities for data-driven modelling in biology. Future nonlocal models may better incorporate experimental data to parameterize and validate these models, leading to more accurate and realistic predictions. However, several problems must be solved, such as numerical approaches for nonlocal models, parameter estimates in conjunction with model validation, and adding noise and uncertainty. Overall, the outlook for nonlocal models in biology is optimistic, with ongoing research aimed at addressing challenges and unlocking the full potential of these models. As our ability to gather and analyze biological data improves, nonlocal models will likely play an increasingly important role in advancing our understanding of complex biological systems.
5 Conclusions
Nonlocal problems in biology and life sciences encompass a broad spectrum of applications and involve a wide range of mathematical tools, including differential equations with nonlocal operators, such as fractional derivatives or integral operators. These operators account for nonlocal interactions and long-range dependencies, making them suitable for modelling biological processes that exhibit spatial memory effects and anomalous transport. As we have seen in this review, examples of nonlocal problems in biology and life sciences include fractional diffusion models, fractional reaction-diffusion equations, and integro-differential equations representing nonlocal transport processes in biological tissues, cellular dynamics, and ecological systems. Nonlocal models have demonstrated their significance in bridging the gap between local models and the complexities of biological systems. Furthermore, these models provide a more realistic and comprehensive representation of biological processes across different scales (multiscale and coupled) by incorporating long-range interactions and spatial dependencies. This review has explored the theoretical foundations, applications, advantages, and challenges of nonlocal models in mathematical biology. As interdisciplinary research continues to flourish, nonlocal mathematical models will more decisively play a pivotal role in advancing our understanding of complex biological systems. Future research in this area holds great potential for further enhancing our understanding of biological processes. In particular, increasing collaboration between mathematicians, modellers, and experimental biologists will facilitate validating and refining nonlocal models using experimental data. This will enhance the models’ predictive capabilities and will better reflect relevance to real-world biological processes.
Acknowledgements
The authors are grateful to the NSERC and the CRC Program for their support. RM also acknowledges the support of the BERC 2022–2025 program and the Spanish Ministry of Science, Innovation and Universities through the Agencia Estatal de Investigacion (AEI) BCAM Severo Ochoa excellence accreditation SEV-2017–0718 and the Basque Government fund AI in BCAM EXP. 2019/00432. This research was enabled in part by support provided by SHARCNET and the Digital Research Alliance of Canada.
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